Heterocephalus glaber (naked mole-rat): 101716369
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Entry
101716369 CDS
T02812
Symbol
Nup54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101716369 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101716369 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101716369 (Nup54)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101716369 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
101716369
NCBI-ProteinID:
XP_004848093
UniProt:
A0AAX6PC64
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Position
Un
AA seq
561 aa
AA seq
DB search
MAFNFGTPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTASSAFSFSAPTNTGTTGLFGGTQNKGFGFGTS
FGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQSTLGGLFSQPTQAPTQSNQLINTASALSA
PTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPSNKD
EDGLVVLVFNKKETDIRSQQQQLVESLHKILGGNQTLAVNVEGIKTLPDDQTEVVIYVVE
RSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVDP
IIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQT
TSMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQSELNAPTQ
FKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLE
DIKLVEHGLNETIHIRGGVFS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttgggactccctcaggtacctcaggcaccgctgcagccactgcagca
cctgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacatctacaactgcaagttctgcattcagcttttctgcccccactaac
acaggcactactggactttttggtggtactcagaacaaaggttttggatttggtaccagt
tttggcacaacaacgggaactagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcaacagcaacaatctacattaggtggtctcttcagtcag
cctacacaagctcctacccagtccaaccagctgataaatactgcaagtgctctttctgct
ccaacacttttgggagatgagagagatgctattttagcaaaatggaatcaactgcaggct
ttctggggaacaggaaaaggatatttcaacaataatattccaccagtggaattcacacaa
gaaaatcccttttgccggtttaaggctgtaggttatagttgtatgcccagtaataaagat
gaagatgggctagtggttttagttttcaacaaaaaagaaacagatattcgaagccagcaa
cagcagttggtagaatcgttgcataaaattttgggaggaaatcagacccttgctgtaaat
gtagagggtattaaaacattgccagatgatcagacagaagttgttatttatgttgttgag
cgttctccaaatggtacctcaagaagagttccagctacaacactatatgcccattttgaa
caagccaatataaaaacacaactacagcaacttggtgtaaccctttctatgactagaaca
gaactttctcctgctcagatcaagcagcttttacagaatcctcctgccggtgttgatcct
attatttgggaacaagccaaggtggataaccctgattctgaaaagttaattcctgtaccc
atggtgggctttaaagaacttctccgaagactgaaagttcaagatcagatgactaagcag
catcagaccagattagatatcatatctgaagatattagtgagctacaaaagaatcaaact
acaagtatggccaaaattgcacaatataagaggaaactcatggatctttcccatagaacc
ttacaggtcctaatcaaacaggaaattcaaaggaagagtggttatgccatccaagctgat
gaagagcagttgcgagttcagctagatacaattcagtctgaattaaatgcacctactcag
ttcaagggccgactaaatgaactgatgtcccaaatcaggatgcagaaccattttggagca
gtcagatctgaagaaagatattacatagatgcagatctgttacgtgagatcaaacagcat
ttgaaacaacaacaggaaggccttagccacttgattagcattataaaggatgatctagaa
gatataaagttggtagaacatggattgaatgaaaccatccacatcagaggtggtgttttt
agttga
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