Heterocephalus glaber (naked mole-rat): 101716915
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Entry
101716915 CDS
T02812
Symbol
Pnn, Pinin
Name
(RefSeq) pinin, desmosome associated protein
KO
K13114
pinin
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101716915 (Pnn)
03015 mRNA surveillance pathway
101716915 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101716915 (Pnn)
03041 Spliceosome [BR:
hgl03041
]
101716915 (Pnn)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101716915 (Pnn)
Spliceosome [BR:
hgl03041
]
Complex C
Other components
EJC/TREX
101716915 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
101716915
NCBI-ProteinID:
XP_012934351
LinkDB
All DBs
Position
Un
AA seq
731 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEREHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDGEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQAEEIMDVLEMVENVKNVIAEQEVMETNQVESMEPSENE
TSKELEPEMEFEVEPDKECKSVSPGKENVSALEVEKDSEEKEGKEPEPQLEPVAQPQPXX
XPQPQPQPQPQPQLQPQLQLQLQSQPVLQPQPISQPETLPLAALQPSSQVFQDQGNLIPE
RKEFPLESVKLTEVPVEPVLTILVESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSS
STSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKH
RRSVDRKRRDTSGLERSHKSSKGGSSRDAKGSKDKNSRSDRKRSISESSRSGKRSSRSER
DRKSDRKDKRR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagttagaaaaggccaaagaaagcctaaaa
aacgtggatgagaatattcgcaagctcaccgggcgagatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggagagcgtcggacaagaagagaatcacgccaagaaagt
gacccagaggatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggtactcttcaaaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagcggcgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaggttgaaaatgagaggagagaactatttgaagagaggcgc
gctaaacagacagaactgcggcttttggagcagaaggttgagcttgcacagctgcaagaa
gagtggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaagagagcatcaggtggtgcgtaac
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaagtaggtatagttcatagtgatggagagaaagaacaggaagaggaggaacaaaaacag
gaaatggaggttaagatggaggaggaaactgaggtaagagagagtgagaagcagcaagat
agtcaggctgaagaaattatggatgtgctagagatggttgagaatgtcaaaaatgtaatt
gcagagcaggaggtaatggaaactaatcaagttgaaagtatggagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctgtttctcctggaaaagagaatgttagtgctctcgaagtagaaaaggattctgaggaa
aaagaaggaaaagaacctgagcctcaacttgagcctgtggctcagcctcagccnnnnnnn
nnnccccagccccagccccagccccagccccagccccagctccagccccagctccagctc
cagctgcagtcccagccagtactccagccccagcctatctctcagcctgagactttgcca
ttagctgctttacagccatcatctcaggtttttcaggatcaaggaaacttaataccagag
cggaaggagtttcctctagaatctgtgaaactcacggaggtgccagtagagccagtcttg
accatacttgtagaaagtaaaagcaaaaccaaaactaggagcagaagtagaggtcgtgct
agaaataaaacaagcaagagtagaagtcggagcagtagcagcagtagttctagtagcagt
tcaactagtagcagcagtggaagcagttccagtagtggcagtagtagtagtcgaagcagt
tccagcagtagctctagtaccagtggtagcagcagcagagacagtagcagcagcactagt
agtagtagtgagagtagaagtcggagtagaggccggggacataatagagatagaaagcac
agaaggagcgtggatcggaagcgaagggatacttcaggactagaaagaagtcacaaatct
tcaaaaggtggtagtagtagagatgcaaaaggatcaaaggataagaattctcggtccgac
aggaagaggtctatatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaaga
gaccgaaaatcagacaggaaagacaaaaggcgttaa
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