Heterocephalus glaber (naked mole-rat): 101717477
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Entry
101717477 CDS
T02812
Symbol
Copa
Name
(RefSeq) coatomer protein complex subunit alpha
KO
K05236
coatomer subunit alpha
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hgl04131
]
101717477 (Copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hgl04147
]
101717477 (Copa)
Membrane trafficking [BR:
hgl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101717477 (Copa)
Exosome [BR:
hgl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101717477 (Copa)
Exosomal proteins of bladder cancer cells
101717477 (Copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
101717477
NCBI-ProteinID:
XP_004858772
UniProt:
A0AAX6PTM2
LinkDB
All DBs
Position
Un
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDVLGKGQEEGGGWDVEEDLELPPELDVPPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL
QTYARGRTTYQALPCLPTMYAYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETVDQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTATEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttaactaagttcgagaccaagagcgctcgagtcaaagggctcagttttcaccccaaa
cgaccctggatcctgaccagtttacacaatggggtcatccagctatgggactatcggatg
tgcaccctcattgacaagtttgatgaacatgatgggccagtacgaggcattgacttccat
aagcaacagccactattcgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtcttttcaccttgcttggtcacttggattatattcgtactacattt
tttcatcatgagtatccttggattctgagtgcctcagacgatcagaccattcgagtgtgg
aactggcagtctagaacgtgtgtctgtgtgttaacggggcacaatcattatgtaatgtgt
gctcagttccacccctcagaagacctggttgtatcagccagcttggaccagactgtgcgc
gtttgggatatttctggcctaaggaaaaaaaacttgtcccctggcgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggacatgatcgtggcgtaaactgggctgccttccaccctactatgccccttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgacacttgccggggtcattacaacaatgtgtcttgtgctgtttttcaccctcgc
caagagctgatcctcagcaattctgaagacaagagcattcgagtctgggatatgtctaag
cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcctggctgcccac
cccaaccttaacctctttgcagcaggccatgatggtggaatgattgtatttaaactggaa
cgagaacgcccagcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacgtcagctagatttcaacagctccaaagatgtagctgtaatgcagttgcggagtggt
tccaaatttccagtgttcaatatgtcatacaatccagcagaaaatgcagtcctactgtgt
acgagagccagcaatttagagaatagtacctatgatctgtacaccatccccaaagatgcc
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatagatttgctgttctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtccaagtgcccaactgtgatgagatcttctatgcaggc
acaggcaatctcctgcttcgggatgcagattccatcacactgtttgatgtgcagcagaag
cggacgctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tctcatgtggcactactggccaaacatgccattgtgatctgtaaccgcaaactggatgct
ctgtgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggtg
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggaccacgggatc
atccgaactctggatttacccatctatgtcacacgagtgaagggcaacaatgtgtattgc
ctagatagggagtgtcgtcctcgggtactcaccattgatcccacggagttcaaattcaag
ctggccctgatcaaccgaaaatatgatgaggtactgcacatggtgaggaatgccaaactg
gtaggccagtctatcattgcttacctccagaagaagggctaccctgaagtggcactgcat
ttcgtcaaggatgagaaaactcgctttagtctggcactggagtgtggaaacattgagatt
gctctggaagcagctaaagcactagatgacaagaattgctgggagaagctgggagaagtg
gccctgctacaggggaaccaccagattgtggaaatgtgctatcagcgcaccaaaaacttt
gataaactttccttcctgtaccttattactggcaacctggagaaacttcgcaagatgatg
aagattgctgagatcagaaaggacatgagcggccattatcagaatgccttatacctgggt
gatgtgtctgagcgagtgcggatcctaaagaactgtggacagaagtccctcgcctatctc
acagctgctactcatggcttagatgaagaggcggagagtctaaaggaaacatttgaccca
gagaaggagacaatcccagacattgaccctaatgctaagctgctccagccgcctgcacca
atcatgccattggataccaactggcccttactaactgtgtctaaaggattctttgaaggc
tccattgccagcaaagggaagggaggagcactggctgctgacatagacattgacacggtt
ggcactgagggctggggagaggatgcagaactgcagctggatgaagatgggtttgtggag
gctacagaaggtttaggggatgatgttcttggcaaaggacaggaagaaggaggtggctgg
gatgtggaagaagatctggagctcccccctgagctggatgtaccccctggggcagctggt
ggggctgaagatgggttctttgtgcccccaaccaaaggaacaagcccaactcaaatctgg
tgcaacaactctcagcttccagttgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcatgaccaggtaggagtaatccagtttggcccctacaagcaactgttccta
cagacatatgcccgaggccgtactacctatcaggctctgccctgccttcccaccatgtat
gcctaccccaaccgcaattggaaggatgcagggctgaaaaatggtgtaccagctgtaggc
ctaaagctgaatgacctcatccagcggttgcagctgtgctaccagctcactacagttggc
aagtttgaggaggctgtggaaaaatttcgttccattttactcagtgtgccacttcttgtt
gtggacaataaacaggagattgctgaggcccagcagctcatcaccatttgccgggagtat
attgtgggtttgtccatggagatagagaggaagaagctgcccaaagagactgtagaccag
cagaagcgcatctgtgagatggcagcctatttcacccactccaacctgcagcctgtgcac
atgatcctagtgctgcggacagccctcaacctcttcttcaagctcaagaacttcaagaca
gctgccacctttgctcggcgcctgctggaacttggacctaagcctgaggtggctcaacag
acccgaaaaatcctgtctgcctgtgagaagaaccccacagatgcctgtcagctcaattat
gacatgcacaacccctttgacatttgtgctgcatcttaccggcccatctaccgtggaaaa
ccagtggagaagtgtccactcagtggggcctgctattcccctgagttcaagggtcagatc
tgcagggtcactacagcaacagagattggcaaagatgtgattggtctaaggatcagtcct
cttcagtttcgctaa
DBGET
integrated database retrieval system
