Heterocephalus glaber (naked mole-rat): 101717612
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Entry
101717612 CDS
T02812
Symbol
Smg7
Name
(RefSeq) SMG7, nonsense mediated mRNA decay factor
KO
K14409
protein SMG7
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101717612 (Smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101717612 (Smg7)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101717612 (Smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
101717612 (Smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
101717612
NCBI-ProteinID:
XP_004862868
UniProt:
A0AAX6Q0Y5
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All DBs
Position
Un
AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWSVSDFIRAFIKFHGHVYLSKSLEKLRP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNESQEETYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGVKGGQQ
RRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLVLQEPSV
IESLAADGSPGLKSVLSTGRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DCSKGITITKNDGKKDNNKRKTESKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQSAAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTPLPAQP
TAQSSSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYW
DSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNGMFNEVYGKNLTASSKAELNPSMPSQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGVDYL
SATSSSESSWHQASTPIGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccgaaaacttgaaatcagaagaacatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtctggaca
tccaggcaggccctgcaggacctgtaccagaaaatgctagttactgatttggaatatgct
ttagacaagaaagtagaacaagatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaagcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaggtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcttatatctgc
cagcactgcctcgtacaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctccaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcatcgctgtgaagttccctttcccagctgcctccactaatctacaaaaagcactttct
aaagcactggaaagccgagatgaggtgaaaaccaaatggagtgtttctgactttatcagg
gcctttattaaattccatggccatgtgtacctgagtaagagcttggaaaagttgaggcct
cttcgagagaaattggaagaacagtttaagaggctgttattccagaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcacctccgtgacttt
agcaatgaaacggaacagcatagttatagccaagatgagcagctatgttggacacagttg
ttggccctctttatgtcttttcttggcatcctgtgcaagtgtcctcttcaaaatgagtct
caggaggagacgtacaatgcctatcctcttcctgcggtcaaggtctccatggactggctg
agactcagacccagagtctttcaggaggcagtggtggatgaaagacagtacatttggccc
tggctcatttctcttctaaatagtttccatccccatgaagaagatctctcaagtactaat
gctacaccacttccagaggagtttgagttacaaggcttcttggctttgagaccttctttc
aggaacttggatttttccaaaggccatcagggtattacaggagtcaaagggggtcagcaa
cgacgaatacgacagcagcgcttgatttctataggcaaatggattgctgataatcagcca
aggttgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaattccagaa
ttaatactggaagaccccagtgaagctaaagagaaccttgttcttcaagaaccatcagtg
atagagtcgctggctgctgatgggagcccaggactgaaatcagtgctgtctacaggccga
aatctaagcaacaactgtgacaccggagagaaaccagtggttaccttcaaagagaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactgtagcaaaggaataactataactaagaatgatggaaagaaggacaacaacaagagg
aaaactgaatccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatcccagacagaactaagaaaaactccggtgtccgaagccaggaaa
acacctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcat
cctggagccttccctcctcttcccagccgtccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagtctgcagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaatcacagccaccttcccagcaaccccttacacctttaccagctcagcca
acagcacagtcttcaagccagttgcaggttcaagctctagctcagcagcaacaatcccct
acaaaagccgtgccagctttggggaaaagcccacctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccactaggg
aaaatcatgcctgtgaaacagccctactaccttcagactcaagaccctataaaactgttt
gagccgtcattgcaacctcctgtaatgcagcagcagcctctagagaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgg
gattcttcctacagcatggctgataacagagctgtaatggcacagcaagcaaacatggac
cgcaggggcaaacggtcaccaggagtcttccgtccagagcaggatcctgtccccaggatg
ccatttgaggaccccaagggctcccctttgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttcctggaagaagcctctttaaatccttgttggagaagcct
tcagagctcatgtcacattcatcctctttcctgtccctcactgggttctctcttaatcag
gaaagatacccaaataacggcatgttcaatgaggtatatggaaagaacctgacagccagt
tccaaagcagagcttaatccctcgatgccctcccaggaaacatcactgtattcccttttt
gaagggactccatggtccccatcacttcctgccagttcagatcattcaacaccagccagc
cagtctcctcattcctccaacccaagcagcctgcccagctctcctccaacacacaaccat
aattctgttccattctccaattttggacccattgggactccagataacagggatagaagg
actgcagatcggtggaaaactgataaaccagccatgggtgggtttggtgttgattatctc
tcagcaacgtcatcctctgagagcagttggcatcaggccagcactccaattggcacctgg
acaggccatggcccttccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccctccgctctggagcagttgttaatgcag
cagaagcagaagcagcagcggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
