Heterocephalus glaber (naked mole-rat): 101717957
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Entry
101717957 CDS
T02812
Symbol
Tgfbrap1
Name
(RefSeq) transforming growth factor beta receptor associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101717957 (Tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hgl04131
]
101717957 (Tgfbrap1)
Membrane trafficking [BR:
hgl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101717957 (Tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
101717957
NCBI-ProteinID:
XP_004844537
UniProt:
A0A0P6J6B0
LinkDB
All DBs
Position
Un
AA seq
857 aa
AA seq
DB search
MMSIKAFTLVSAVERELLMNDQERVNIECVECCGRNLYVGTSDCFIYHFLLEEKVLPSGT
VAFTATKQLHRHLGFKKPVSELRAASALDRLLVLCDSCISLVSMHSLEPVPSGARIKGAS
TFALNENPVGGDPFCVEVCILSIKRRTIQVFLVYEDRVQIVKEVSTPEQPLAVAVDGHFL
CLALSTQYIILNYNTGFSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAVCFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPREKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGHLDVRELISLHPFLLPTSSSFTRCHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
AWLEKHRKYFALGLLYHYNKQDAAAVQLWVNIVNGDIQDSTRSDLYEYVVDFLTYCSDQQ
LVWTYADWVLQKSEEVGVQVFTKRSVDEQQQNSFNPDNVITCLKKYPRALVKYLEHLVVD
RSMQKEEYHTQLAMLYLEELLQQRVATSSSDAATTEMQTKLRHLLQKSDLYRVHFLIERI
QGAGLPVERAILHGKLGEHEQALRILVHELGDTAAAEDYCLWSSEGQDAPCRQRLFHTLL
TMYLQAGPLAPELTVAAVDLLNRHTSEFDATQVLQLLPGSWSVQLLRPFLTGAVRGSIHT
RRTAQVALGLARSENLLHAYDKMRLKGSAIQLSDRNLCQLCQHPFSEPVFIRYPNGGLVH
THCAASRHSSPTPGTRT
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcatcaaggccttcacactggtctctgccgttgagcgggagcttctgatgaat
gaccaggagcgcgtcaacatcgagtgtgtggagtgctgtggccggaacctctacgtgggc
accagtgactgcttcatctaccacttcctactggaggagaaggtgttgccctcagggacc
gtagcctttacagccaccaagcagctacacagacacctgggattcaagaagcctgtgagt
gaactacgggcagcctcggccctcgacaggctgctggtgctctgcgacagctgcatctcc
ctggtcagcatgcacagcctggaacccgtgccctcgggtgcacgcatcaaaggggcctct
accttcgcgctcaacgagaaccccgtgggtggggacccattctgcgtggaagtctgcatc
ctctccatcaagcgcaggaccatccaggtgttcctggtgtacgaggatcgtgtgcagatt
gtcaaggaggtgtccacgccggagcagcccctggctgtggctgtggatggccacttccta
tgcctggccttgagcacacagtacatcatcctcaactacaacacaggcttctcacaggac
ttgtttccctactgcagtgaggagaagcggccaattgtcaagaggatcggcaggcaggag
ttcctgctggctggcccaggtggcctgggcatgtttgccactgtggccgggatatcccag
cgggctcctgtgcactggtcggagaacgtgatcggggcggctgtgtgcttcccgtacgtc
atcgcgctcgacaatgagttcatcacagtgcacagcatgctggaccagcagcagaagcag
accctgccctttaaggaaggccacatcctgcaggacttcgaaggaagagtgatcgttgcc
acaagtaaaggagtctacatcttggtcccattacctctggaaaaacaaatacaggatctg
ctggcaagccacagagtggaggaggctttggtcttggcgaaaggagcccggaggaacatt
ccaagggaaaaatttcaggtgatgtacagaaggattctgcagcaggctggcttcatccag
tttgctcagcttcagttcctggaagctaaagagctcttcagaagcgggcaccttgatgtc
cgggaactgatctccctgcaccccttcctgctgcccacctcctcctccttcacccgctgt
caccctccactccatgagtatgcagacctgaaccagctgacgcagggcgaccaggagaag
atggccaagtgcaagcgcttcctcatgagctacctgaatgaggtccgaagcactgaggtg
gccaatggctacaaggaggacattgacacggccctactcaagctgtatgcggaggctgac
catgacagcctgctggacctcctggtcactgagaacttctgccttctgacagacagtgca
gcctggctggagaagcacagaaagtattttgcactggggctgctctaccactacaataag
caagatgctgctgcagttcagttgtgggtgaacattgtgaatggagatatccaggactcc
acgcgctctgacctgtatgaatacgtcgtcgattttctgacctactgctcagaccagcag
ctggtgtggacctatgccgactgggtcctacagaaaagcgaggaggttggagttcaggtc
ttcaccaagagatctgtggatgagcagcagcagaacagctttaatccagacaatgtcatc
acctgccttaagaaataccccagagccctggtcaagtacctggagcatctggtagtagac
aggagcatgcagaaggaagagtaccacactcaactagccatgctctacctggaggagctg
ctgcagcagagggtggccaccagcagcagtgatgctgcaaccaccgagatgcagaccaag
ctgcggcacctgctccaaaaatctgacctgtaccgagtccacttcctgatagagcggatc
cagggcgctgggctgcctgtggagcgcgccatcctgcacgggaaactgggtgagcacgag
caggccctgcgcatcctggtgcatgagctgggggacacagcggcggcggaggactactgc
ctgtggagctccgagggccaggatgcgccctgccgccagcgcctcttccacacgctgctc
accatgtacctgcaggccgggcccttggcccctgagctcactgtggctgccgtagacctg
ctcaaccgccacacctctgagtttgatgccacccaggtgctgcagctgctacccggctcc
tggtcggtgcagctgctccgcccattcctcaccggggccgtccggggcagcatccacacc
aggaggactgcacaggtggctcttggcctggccaggtcggaaaacctgctccatgcatat
gacaagatgaggctgaaaggcagcgccatccagctctcagaccgaaacctttgccagctg
tgccagcatcccttctcggagcctgtcttcatccggtacccaaacggggggcttgtgcac
acccactgtgctgccagcagacacagctcccccacccctggcacccggacttga
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