Heterocephalus glaber (naked mole-rat): 101718501 Help Entry 101718501         CDS       T02812                                  Symbol Col4a1 Name (RefSeq) collagen type IV alpha 1 chain   KO K06237   collagen type IV alpha Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl04151   PI3K-Akt signaling pathway hgl04510   Focal adhesion hgl04512   ECM-receptor interaction hgl04820   Cytoskeleton in muscle cells hgl04926   Relaxin signaling pathway hgl04933   AGE-RAGE signaling pathway in diabetic complications hgl04974   Protein digestion and absorption hgl05146   Amoebiasis hgl05165   Human papillomavirus infection hgl05200   Pathways in cancer hgl05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:hgl00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101718501 (Col4a1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101718501 (Col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101718501 (Col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101718501 (Col4a1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     101718501 (Col4a1)   09154 Digestive system    04974 Protein digestion and absorption     101718501 (Col4a1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101718501 (Col4a1)   09162 Cancer: specific types    05222 Small cell lung cancer     101718501 (Col4a1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101718501 (Col4a1)   09174 Infectious disease: parasitic    05146 Amoebiasis     101718501 (Col4a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101718501 (Col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hgl04147]     101718501 (Col4a1)    00536 Glycosaminoglycan binding proteins [BR:hgl00536]     101718501 (Col4a1) Exosome [BR:hgl04147]  Exosomal proteins   Exosomal proteins of other cancer cells    101718501 (Col4a1) Glycosaminoglycan binding proteins [BR:hgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101718501 (Col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  101718501 NCBI-ProteinID:  XP_004858613 UniProt:  A0AAX6PS09 LinkDB All DBs Position Un AA seq 1670 aa AA seqDB search MGPRLGLWLLLLPAALLLHEERGRAAAKGGCDGAGGCGKCDCHGVKGQKGERGLPGLQGV IGFPGMQGPEGPHGPPGLKGDAGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGP QGIPGCNGTKGERGPSGPPGLPGFAGNPGPPGPPGMKGDPGEILRHVPGTLLKGERGFPG APGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGDQGVSGP PGVPGQAQVKQKGDFIPTGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGERGERG SPGLPGDSGYPGLPGRLGPKGDKGEAGPPGAPGIVIGTGPLGEKGDRGYPGSPGLRGEPG PKGYPGIPGQPGPPGLPTPGQPGSPGFPGVRGEKGDQGPPGASLPGPSGRDGVPGPPGLP GPPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGFSGEAGEKGQKGDSCLICDMEGLRGPP GPQGPPGEIGFPGQPGAKGDRGLPGRDGLEGVPGPQGTPGLMGQPGAKGEPGEIIFDARL KGDKGDPGFPGQPGVPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGAGFPGNRGD IGPPGPPGFGPTGPIGVKGQAGFPGSPGVPGLPGPKGEAGRAVPLPGPPGADGLPGSPGF PGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFN GLPGSPGVPGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGGPGIPGEHGALGPPGLQG IRGDPGPPGAQGPAGPPGPPGLGPPGAMGPPGGQGLPGSSGPPGLKGEKGFPGFPGLDMP GPKGDKGTQGLPGLTGQSGLPGLPGQQGTPGIPGFPGLKGEMGIMGAPGQPGLPGPLGTP GLPGEKGDHGFPGSSGPRGDPGLKGEKGDAGLPGKPGTMDKLDMGSVKGEKGDQGEKGQI GPTGDKGSRGDPGTPGVPGKDGQAGYPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLP GTPGEKGAPGIPGLQGLPGSPGLKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGSPG EKGEKGSAGMPGVPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLSGIPGVKGEAGLPG TPGLSGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGVPGLAGS PGFPGSKGEQGLMGPPGPQGQPGIPGAPGHAVEGPKGDRGPQGQPGLPGLPGPMGPPGLP GLDGLKGEKGNPGWPGAPGVPGPKGDLGFQGLPGIGGSPGIAGSKGDMGPPGVPGFHGQK GLPGIQGLKGDQGDQGLPGPKGLQGPPGPPGPYDVIKGDPGVPGPEGPQGLKGLQGPPGP KGQQGVTGSAGVPGPQGNPGYDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGT PSVDHGFLLTRHSQTTEDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFST MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCSVCEAPAMVMA VHSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR GTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5013 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcctctggctgctgctgctgcccgccgcccttctgctccacgag gagcgcgggcgggccgccgccaagggtgggtgtgatggtgctggtggttgtggaaaatgt gactgccacggagtgaaaggacaaaagggagagagaggcctcccgggcctgcaaggtgtc attgggtttccgggaatgcaaggacccgaggggccgcacggacccccaggactgaagggc gacgctggagaacctgggcttcctggcacgaaagggacacgtgggccacctggagcatcc ggttaccctggaaacccaggacttccgggtatccctggccaggatggtcccccggggccc caaggcatcccgggatgcaacggtacaaagggtgagagaggaccttccgggccaccgggc ttgcctgggttcgctggaaatcccggaccgccggggcccccaggaatgaagggggacccg ggtgaaatactccgccacgtgcctggaacgctgctgaaaggagagcgtggattcccggga gccccggggacgcccggctctccaggactgccagggctccagggacccgtgggccccccc ggatttaccggaccgccaggtcccccaggccctcccggtcccccaggtgaaaaggggcag atgggctcgagttttcaggggccgaaaggtgacaagggtgaccagggcgtcagcgggcct cccggagtgcctggccaggcacaggtgaagcagaagggggacttcatcccgacaggggag aagggtcagaaaggtgaacccggctttcagggaatgccaggggttggagagaaaggcgaa ccaggaaagcccgggcctcggggaaaacctggaaaagatggtgaaaggggagagaggggg agtccgggcctccctggcgactcggggtacccagggctcccgggccggctgggccccaag ggagacaaaggcgaagctggtcctccaggcgccccgggaattgtcataggcaccggacct ctgggagaaaagggagaccgaggctacccaggctctcctgggctgagaggggagccaggc cccaaaggttaccctggaattccaggccagccaggccctccaggccttcccaccccaggg cagcctggttctcccggcttccccggtgtaagaggagaaaaaggcgaccaaggaccccca ggcgcatctctgcccggacccagtggaagggacggggtccccggaccccctggcctcccc ggaccccctgggcagccaggccacaccaacggcatcgtggagtgtcagcccggaccgcca ggcgaccagggtccacccgggactcccggacagccgggattttcgggcgaagctggagaa aaaggccagaaaggagacagctgcctcatctgcgacatggaaggactccgagggcccccc gggccacaggggcccccaggagagatcggtttcccaggacagccaggggccaaaggtgac agaggcctgccaggcagggatggcctcgaaggggtgcctggtccacaaggtaccccgggg ctgatgggccagccaggagctaagggagagcctggcgagatcatcttcgatgcgcggctg aaaggtgacaaaggagacccaggttttccaggacagcccggtgtgcccggaagagcagga tcccccggaagagatggccacccaggacttcccggccccaaaggctccccgggctcagta ggactcaagggagaacgtggcccccctggaggagctggcttccctggcaaccgtggtgac atcggcccgcctgggcctccgggatttggtccgactggccccatcggtgtaaaaggacaa gcaggctttcccgggagccctggagtcccaggcctgccaggtccaaaaggcgaagcggga agggctgttcccttacctggcccccctggagcggatgggctcccagggtcccccggattc cccggaccccaaggtgaccgaggcttccctgggaccccaggccggccaggcctccctggg gagaagggcgctgtgggccagccagggattggatttcctgggcctccgggccccaaaggt gtggatggcttacccggagacgtgggacctcccggaagcccaggccgcccgggatttaac ggcttgcctggcagcccaggtgtacccggccagaagggagagcctggagtaggtctccct gggcttaaaggactgcccggccttcctggcatccctggcacccctggagagaagggcagc atcgggggaccaggcatccctggggaacacggagcgcttggcccccctgggcttcagggc atcagaggtgaccccggacctcctggagcacagggccccgcaggcccaccggggccaccg ggcctcggtccccctggagccatgggaccccccggaggacagggcctaccagggtcgtca ggccctcctggactgaaaggagagaagggattccccgggttcccaggactggacatgccc ggccctaaaggagacaaagggacccaaggacttcctggcctcacaggacaatcggggctg cctggccttcctggacagcagggcacacctggaattccggggttcccaggtctcaaggga gagatgggcatcatgggcgccccggggcagccgggcttgccaggaccactgggcaccccg ggattgcctggtgaaaaaggggaccacggcttcccgggctcctcgggacccaggggagac cctggcttgaaaggtgaaaaaggggatgccgggctccctggcaagccggggaccatggat aaactggacatgggcagcgtgaagggagagaagggagaccaaggagagaaaggacaaatt ggacccactggtgacaaaggatcccgaggtgaccctggaaccccaggagtgcccggcaaa gatgggcaggcggggtacccgggacagccaggacccaagggcgacccaggtataagcggc acgccgggtgctcccgggctgcctggacccaaaggatcggttggtggcatgggcctgcca gggacacctggagaaaagggcgcgccgggcatccctggcctgcagggcctccccggctcg cctggactgaaaggggcaaagggagagaagggacaggcaggcctgcctggcatcggaatt cctgggcgacccggagacaagggagaccaggggctggcaggcttccctggcagccctgga gagaagggagagaaaggcagtgccgggatgcccggtgtgccggggtctccgggccccaaa gggtctccaggcagcgtcggctacccaggaagcccgggtttgcccggggagaagggtgat aagggccttccgggactgagcggcatccccggagtcaaaggagaagcaggtctccccggg acacctggcctctcgggcccagctggccagaagggcgagcccggcagcgacggcatcccg ggatcagcaggggagaagggcgagccaggtctccccggacgaggtttcccagggttccca ggggccaaaggagacaaaggttcaaagggtgaagtgggcgtccccggcctggccgggagc cccggatttcctggatccaaaggcgagcaagggttgatgggtcctccagggccccaagga cagcccggcatacctggtgctcctggccacgccgtggagggtcccaaaggagaccgggga ccacagggacaacctggcctgccggggcttccgggacccatggggcctccagggctgcct gggctggacggactgaaaggagaaaaggggaacccaggctggccgggggcgcctggcgtc ccagggcccaagggagacctggggttccagggcctgccgggtattggcggctctccggga atcgcaggctctaagggcgacatggggcccccaggagttcccggattccatggtcagaaa ggtcttcctggtatccagggattgaaaggcgatcagggcgatcaaggccttcccggtcct aaaggtcttcaaggtccccccggccctccaggtccctatgatgtcatcaaaggcgatcca ggcgttcctggtcctgagggtccccaaggtctgaaagggctccagggacccccaggaccc aaagggcagcaaggtgtgaccggctctgcaggtgtccctggacctcaaggaaacccaggc tatgatggcgcccctggccagaaaggagagacgggtcccttcgggcctcctgggcccaga ggattccccggccccccagggcctgatgggctgccaggatccatggggccccccggcacc ccatccgttgaccatggcttcctgctgaccaggcacagccagacgaccgaggacccgctg tgtccgccagggaccaagatcctttaccacggctactctctgctctacgtgcagggcaac gagcgggcccacggccaggacctgggcacggctggcagctgcctgcgcaagttcagcacc atgcccttcctgttctgcaacatcaacaacgtctgcaacttcgcctcccgcaacgactac tcctactggctgtccacgcccgagcccatgcccatgagcatggcacccatctccggggac aacatccggcccttcatcagcaggtgctccgtgtgtgaggcgcccgccatggtgatggcc gtgcacagccagactatccagatcccgcagtgccccagcgggtggtcctcactctggatc ggctactccttcgtgatgcacaccagcgcgggtgccgagggctccggccaagccctggcg tcgcccgggtcctgcctggaggagttcagaagcgcacccttcattgagtgccacggccgc gggacctgcaattactacgccaatgcttatagcttctggctggccaccattgagaggaac gagatgttcaagaagcccacaccctccaccttgaaggccggagagcttcgcacccacgtc agccgctgccaagtgtgcatgcgaagaacataa

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