Heterocephalus glaber (naked mole-rat): 101718548
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Entry
101718548 CDS
T02812
Symbol
Sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeats 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hgl04131
]
101718548 (Sh3tc1)
Membrane trafficking [BR:
hgl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101718548 (Sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_NPHP3
TPR_2
SH3_9
TPR_1
SH3_1
SH3_2
Csd3_N
TPR_7
Motif
Other DBs
NCBI-GeneID:
101718548
NCBI-ProteinID:
XP_004847397
LinkDB
All DBs
Position
Un
AA seq
1420 aa
AA seq
DB search
MAAVGHPEHPGACCVGRRRRRLSPSCRKHPWVLLIWKAGPGQQHGDNTGGGTGDGQTGAL
LRARGPARWGGAGNLRRNGAPGAYGGCGHGHRSCSGAAGCGVEPVCPSPVLSAASLPGAV
DLAGIRTLTMGLPASPAQACSWTRGAPHCPGQADTQALCPADLTLQLRAVHRKSGRPDPG
LQQALRGRLRLLENDSLEVARVLGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALG
FTHHCLEALLVDATFWLLAPGEEEEEEEEEEAAICVQVAEDALRLMQESLLAQEGPFFVL
CPDHRVRLTPGAQGAEKAQPHRPAPGGSLGEATPAADSSASGPGAAPEQPLGPFHQWALR
VPWDPAEDSVDGPGPPDTLLVGCGRVSAVADWQSSGPEELSLHTGDLLELLSARVPGLPW
CVAQHVASGCVGFVPSSLICLQDPASELEDAIFLDEEERSFFSSEGRFSEENARQLLGRM
SGRDMCTTYSLDRLEEAEPEQPEEHAEAPPLCPSPELQETLQTVRGVLQQCKSCPHCPEE
PVPWGPPAASSSWSSPDPEEPPFCLDAKDGWAGPEAPGSLLQLLNAPVYEAGFRSLYNDS
LSWLSSMSSGLADEEELADRLAQARGAAKKAGLGMALARLCFLLGQLCARRLKLSQARVY
YEEALGALGGCFRDLFLVVAVHTHLASVYLKQKNRDKCAQAMSRAAALLLGTPGQVGSSE
AKAELLRFALRRAIVAQSPQAEARACFLLVQHHTRLRQPEQTLPYLERLLLLHKALGTLH
AAWPADCYLLLADTYSWKCLPHLALSCIRAASLGTRGSLASSLRSVDLVLQSGPRLHAQT
RAPCLPAQVAHYLRQALASLASGPGQGLRGALYASLAQLYSHHGQHGQAIAFMTRAVEAD
TTAGARPVVAHLTALAWLHMLQGQTLVALHILESVLDSAVASEDQEGVVANMAAMALKRM
GRTQQAAEGYYRALHTARRLGQRQNQAVVLANFGALCMQAGAGRLAQHYFLEAIGVFSLL
PSGECGRDFTQVLLRTGQLYTCRGLVQQGKCYYQWAFLVAVETDHLESQLCAVQRLCHFY
SSVAPDKAQSVIYLEFQLTLARKVADKVLEGQLLEAISRLYLSLGTERAYKSALDYTKQS
LGIFIDLQKKEKEAYAWLQAGKIYYILRQNELVDLYIQVAQNAALYTGDPNLGLELFEAA
GDIFFNGTWEREKAVSFYRDRALPLAVTMGNREAELRLCNKLVALLAALEAPQEGLEFAH
EALELSITLGDQLNERVAYHRLATLHHRLGRSELAEHFYLKALSLCRSPLEFEEETLYYV
KVYLVLGDIIFYELKDPFDAAGYYQLALAAAVDLGHKKMQLKLCTRLATIYHHFLVDREM
SLFFYQKARTFASELKGRRAGLAPQHLWARAPWLAPGPPP
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtggggcaccctgagcaccccggtgcctgctgcgtgggacggcgtagacgg
aggctgagtccatcctgcaggaagcacccttgggtgctgctgatctggaaggcagggccg
gggcagcagcatggtgacaacacgggaggagggactggggacggccagacaggggccctg
ctcagagcccgtggcccggccaggtggggtggagctgggaacctgaggagaaatggggct
cccggtgcctatgggggctgcggtcacggtcacaggagctgctctggggctgctggctgc
ggggtggaacctgtgtgcccttctcctgtcctctcagcagccagtctccccggtgctgtg
gaccttgctgggattcgaaccctgaccatggggctccctgcaagcccagcccaggcctgc
agctggacccggggagccccacactgccctggccaggctgacacacaggccctctgccct
gcagacctgaccttgcagctgcgggccgtgcacaggaagagcgggcggccagacccaggc
ctgcagcaggctctgcgtggccgtctgcgcctgctggagaatgacagcctcgaggtggcc
cgagtgctcggggaactctctgccaggctgctgtccatccacagcgaccaggaccggatc
gtggtgacgtttaagaccttcgaggagatctggaagttttccacctaccatgccctcggt
ttcacgcaccactgcctggaggcgctgctggtggacgccaccttctggctgctggcgcct
ggcgaggaggaggaggaggaggaggaggaagaggcagccatctgtgtgcaggtggctgag
gacgccctgaggctgatgcaggagagcctcctggcccaggaagggcccttcttcgtcctg
tgtcctgaccaccgcgtgagactgacgccgggcgcccagggcgcagagaaggcgcagccc
cacagaccggctccggggggctccctgggagaggcgaccccagcagcagactcctcagcc
tccggccctggcgcagccccagagcagcccctgggtccgttccaccagtgggctctgaga
gttccctgggaccctgccgaagattctgtggatggacctgggccacccgacacgctgctg
gtggggtgcggccgggtctccgcagtggccgactggcagagctcaggccctgaagagctg
tccctccatactggtgacctcctggagctgctcagtgcccgggtgcctggcctgccctgg
tgcgtggcccagcacgtggcctcaggctgcgtgggcttcgtgccctcgagtctcatctgc
ctgcaggaccctgcatctgagttggaggatgctatctttctggacgaggaggagcggtca
ttcttcagcagcgagggacgcttttctgaggagaacgcccggcagctgctgggcaggatg
tccggcagggacatgtgcaccacgtacagcttggacaggctggaggaggccgagcccgag
cagccggaggaacacgcagaggcgccgcccctttgcccatccccggaactgcaagagacc
ctgcagacagtgaggggcgtcctccaacagtgcaagagctgcccacactgccccgaggag
ccagtgccctggggccccccagcagcatccagcagctggagctcaccagaccctgaggag
ccccccttctgcctggatgccaaggacggctgggccggccccgaggccccgggctccctg
ctgcagctcctgaatgcaccggtgtatgaggccggcttccgcagcctgtataatgactca
ctgtcgtggctgagcagcatgtccagcggcctggctgatgaggaggagctggctgaccgc
ctggcacaggcccgaggggcggccaagaaggccggcctgggcatggctctggccagactc
tgcttcctgctggggcagctatgcgcccggaggctcaagctgtcccaggcccgggtgtac
tatgaggaagccctgggcgccctggggggctgcttcagggacctcttcctggtggtagct
gtgcacacccacctggccagcgtctacctgaagcagaagaacagggacaagtgtgcccag
gccatgtccagggctgcggccctgctcctggggacgcccggccaggtgggcagctccgag
gccaaggccgagctcctgaggtttgcgctgcgccgggccattgtggcccagagcccacag
gcggaggcccgggcctgcttcctgctagtccagcaccacacacgcctcaggcagcccgag
cagaccctgccctacctggagcggctgctgcttctgcacaaggccttggggaccctgcat
gctgcatggcccgcagactgctacctgctgctggcagacacctacagctggaagtgtctg
ccccacctggccctgagctgcatcagggcggcctcgctggggacaagggggtcgctagcc
agctcccttcggagcgtggacctggtcctccagagcggcccccggctgcatgcccagacc
agggccccctgcctccccgcacaggtcgcccactacctcagacaggcgctggcctccctg
gcctcgggccccgggcaggggctgcgtggtgccctctacgccagcctggcccagctgtac
agccaccatggacagcacggccaggccatcgccttcatgacacgggcggtagaagccgac
accacagccggggcccgccctgtggtggcccacttgacggccctggcctggctgcacatg
ctccagggtcagaccctggtggccctgcacatcctggagtctgtcctggactcggcagtg
gccagtgaggaccaggagggagtggtggccaacatggcggccatggccctgaaacggatg
ggcaggacccagcaggcggccgagggctactaccgtgccctgcacactgcccggcgcctg
ggccaacgccagaaccaggcggtggtcctggccaacttcggggccctgtgtatgcaggcc
ggcgccggccggctggcccagcactacttcctggaggccatcggggtcttctcgctgctg
cccagcggggagtgtggccgggacttcacacaggtactgctgcggacgggacagctgtac
acctgccggggcctcgtgcagcagggcaagtgctactaccagtgggcgttcctggtcgcc
gtggagacggaccacctagagagccagctgtgcgctgtccagcggctctgccatttctac
agcagcgtggcgcccgacaaggcacagtccgtcatctacctggagttccagctcaccctg
gcccggaaggtggctgacaaggtgctggaggggcagctcctggaggccatcagccggctc
tacctgtcgctgggcactgagcgggcctacaaatctgctctggactacaccaagcagagc
ctggggatattcatcgacctgcagaagaaggagaaggaggcatatgcctggctgcaggcg
gggaagatctactacatcctacgccaaaatgagctagtggacctgtacatccaggtggca
cagaacgcggccctgtacacgggggaccccaacctggggctggagctgttcgaggcggct
ggagacatcttcttcaacgggacctgggagcgggagaaagcggtgtccttctaccgtgac
cgggcactgcccctggccgtgaccatgggaaaccgggaggcggagctgcggctgtgtaac
aagctggtggcactgctggctgcgctggaggcgccccaggagggcctggagttcgcccac
gaggccctggagctcagcatcaccctgggtgaccagctgaatgagcgtgtggcctaccac
cggctggccaccctgcaccaccgactgggccgcagcgagctagccgagcacttctacctg
aaggcactgtcgctgtgtcgctcgccgctggagttcgaggaggagacactatactatgtg
aaggtgtacctggtgctgggcgacatcatcttctacgagctgaaggacccctttgatgcg
gctgggtactaccagctggcgctagcagcagctgtggacctgggccacaagaagatgcag
ctgaagctctgcacgcggctggccaccatctaccaccacttcctggtggaccgcgagatg
tcgctcttcttctaccagaaagccaggaccttcgcctcggagctcaagggccgcagggcc
ggccttgccccccaacacctctgggcccgtgccccctggctggccccggggcccccacct
tga
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