Heterocephalus glaber (naked mole-rat): 101718684
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Entry
101718684 CDS
T02812
Symbol
Ddx1
Name
(RefSeq) DEAD-box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101718684 (Ddx1)
03016 Transfer RNA biogenesis [BR:
hgl03016
]
101718684 (Ddx1)
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101718684 (Ddx1)
Spliceosome [BR:
hgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101718684 (Ddx1)
Transfer RNA biogenesis [BR:
hgl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101718684 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
Paramyxo_PNT
DUF5766
Motif
Other DBs
NCBI-GeneID:
101718684
NCBI-ProteinID:
XP_004869989
UniProt:
A0A0P6K233
LinkDB
All DBs
Position
Un
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGVCCQSREVKEWH
GCRATKGLVKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEDFKFPPKDGFVALCKAPDSYVVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPRLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SAEMWSEAVKVLKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgaaatgggtgttatgcctgagatagcccaggcagtggaagagatg
gattggcttctccccactgacatccaggcggagtctatccccctgatcctaggagggggt
gacgtgctgatggctgcagaaacaggaagtgggaaaactggtgcattcagtattccggtc
atccagatagtgtatgaaactctgaaagaccaacaggaaggcaaaaaggggaaaacaaca
attaaaactggtgcttcagtgctcaacaagtggcagatgaacccatatgatagaggctct
gcttttgcgattgggtcagatggggtttgttgtcaaagcagagaagtgaaggagtggcac
ggatgccgagctaccaaaggactggtgaaagggaaacactactatgaagtatcctgtcat
gaccaagggctctgcagagtcgggtggtctaccatgcaggcctccttagaccttggtact
gacaagtttggattcggctttggtggaacgggaaagaaatcccacaataaacagtttgat
aattatggagaggaattcactatgcatgatactattggatgttacctggatattgataaa
gggcatgtaaagttctccaaaaatggaaaagaccttggtctggcctttgaaatcccccca
catatgaaaaaccaagccctctttcctgcctgtgttttgaagaatgctgagctgaaattt
aacttcggcgaagaagactttaagtttccaccaaaagatggatttgttgctctctgcaag
gcaccagatagctatgtggtcaagtcacagcattcaggcaacgcacaggtgactcaaaca
aagtttctccccaacgctcccaaggctctcatagtcgaaccctcccgggagctcgctgaa
caaactttgaataatgtcaagcagtttaagaaatacattgataatcctagattaagggag
cttctgataattggaggtgttgcagcacgggaccagctctctgttttggagaatggggtg
gatatcgtcgtcgggactcctggaaggctagatgacttggtgtcgactggaaagctgaac
ctgtctcaagttcggttcctggtcctggatgaagcagacggtcttctttctcaaggttat
tctgattttataaatcggatgcacagccagattcctcagattacctctgatggaaaaaga
ctccaggtgatcgtttgctctgctaccttgcactcctttgatgtgaagaagctgtctgag
aagataatgcattttcctacgtgggtggatttaaagggagaagattctgttccagacact
gtgcaccacgtggttgtccctgtgaaccccaagactgacagactctgggaacggctgggg
aaaaaccatatccggaccgatgatgtccatgcaaaagacaacacaagacctggggccaac
agcgcagagatgtggtctgaagctgtcaaagtcctgaagggagagtatgccgtccgagcc
atcaaggagcacaagatggaccaggcaatcatcttctgcagaaccaagatcgactgtgac
aacttggagcagtacttcatgcagcagggaggaggccctgataagaaaggacaccagttc
tcgtgtgtttgtcttcatggtgacaggaagcctcacgagagaaagcagaacttggaaaga
ttcaagaaaggagatgtaagattcttgatctgcacagacgtagctgccagagggattgat
atccacggtgttccttacgttataaacgtgaccctgcctgatgagaagcagaactacgtg
caccgcatcggccgcgtagggagagcagaaaggatgggactggccatttctctggtggcg
accgaaaaagaaaaggtgtggtaccacgtgtgcagcagccgcgggaagggctgctacaac
acccggctcaaggaggacggtggctgcaccatctggtacaacgagatgcagctgctgtct
gagatagaagaacacctgaactgcaccatttctcaggtggagccagacataaaggttccg
ctggatgagtttgacgggaaggttacctacggtcagaaaagggccgccgggggtgggaac
tacaaaggccacgtggacatcctggcccctaccgtccaggagctggctgccctggagaag
gaggcccagacctccttcctgcacctgggctacctccccaaccagctcttcaggaccttc
tga
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