Heterocephalus glaber (naked mole-rat): 101718978
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Entry
101718978 CDS
T02812
Symbol
Vps50, Ccdc132
Name
(RefSeq) VPS50, EARP/GARPII complex subunit
KO
K23288
syndetin
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hgl04131
]
101718978 (Vps50)
Membrane trafficking [BR:
hgl04131
]
Protein recycling
Others
EARP complex
101718978 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101718978
NCBI-ProteinID:
XP_004862740
UniProt:
A0AAX6Q186
LinkDB
All DBs
Position
Un
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSEFGALENLRVPGKEEFRELREQPSDPQAEQELINSIEEV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDILKRQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLLGLLKSLRTIKTL
QRTDVRLSELLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAENT
DTKFQKLQYKDLCTHVTPESYIPCLGDLCKALWEVMLSYYRTMEWHEKYDNENSASVSEG
NTMMDTEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVTTSSKTMTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSTDPTATLTAGEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVIATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSAKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattaaatctctcatgacccgacagggcctgaagagccctccggagagcctc
agcgagtttggtgcccttgagaatctccgggtccctggaaaggaggaattcagggaactt
cgagaacagccaagtgatcctcaagctgaacaagagctaattaatagtattgaagaagta
tatttttctgcggactcatttgatattgttaaatatgagctggagaagctcccacctgtt
cttaatttgcaagaattagaggagtacagagacatattgaaacgacagcaagctgcagtc
tctaaaaaagtagcagatttaattcttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagactggtcttcagttggctgctgtgatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgcttggacttctgaagtctttgagaactataaaaacactg
caaagaacagatgtacgtttaagtgaattgctagaggaggaagactatccaggagctatt
cagctgtgtctagaatgccagaaagctgccagcacttttaaacattatagttgtataagt
gagctgaattcaaagctacaagatactttagaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaaaaattttgatattaatcattataccaaggttcaacaagcttat
cggcttcttggaaaaacacagactgcaatggatcaacttcatatgcacttcacccaagcc
attcacaatactgtgtttcaagttgtccttggatatgtggaactatgtgcagaaaacaca
gatacgaaattccaaaagctgcaatacaaagatctctgtacacatgttacaccagaaagc
tatattccctgccttggggatctctgcaaagcactgtgggaagttatgctcagctattac
aggaccatggaatggcatgaaaagtatgacaatgagaacagtgcttcagtttctgaaggg
aatactatgatggatactgaagaaactaattttgatcgtggctatgtaaaaaagaaatta
gaacatgggctaacgcgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaacggatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttaatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaagaatct
attagaaaacaaagtgtcaattatttcaagaactaccatagaacacgacttgatgagctg
agaatgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagtatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aagcagcctgttacaacttcttcaaagacaatgactttatttgaacagtactgtagtggt
gggaatccatttgaaattcaggccaaccacaaagatgaagaaacggaagatgttttggct
tctaatgggtatgagtctgatgaacaggaaaagagtgcctatcaggagtatgacagtgac
agtgacgtccctgaggaactcaagcgagattacgtggatgagcagacaggggatgcccct
gtgaaaagtgtttctcgagaaaccctaaaaagcaggaagaaatcagattatagtctaaat
aaagtgaatgcacctatcttaacaaatacaacattgaatgtaataagacttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgcttttgatgttatccatttcatgtct
cagctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggcctcggccttagtagtagtagactaagaacaactctaaacagaatacaa
gaaagccttattgatctggaagtttcaactgaccctactgccacactcacagcaggagaa
gaaagaaaagagaaggtacccagccctcacctcagccatctagtggttttgacatctggg
gatacattgtatgggttggcagaaagagtgatagccacagaatccttggtgttcctggca
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgccgtcaagaagccc
tttctgcagcagttctattctcagacagtctcaactgctagtgaactacggaaaccgatt
tattggattgtagctggtaaagccatcgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaggagattatgtcacagcacaacatatatgtagatgcattgtta
aaggaatttgagcagtttaataggagactaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactgtgggaacactgtatacgattggctaatagaactattgta
gaaggatatgccaatgtcaagaagtgcagtaatgaaggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatataagacctattcccgataaa
gaatttgtggaaacatatatcaaagcctactacttgactgagaatgacatggaacgctgg
atcaaagagcacagggaatattcagcgaagcagttgaccaatctggtaaatgtttgcctg
ggatctcatatcaataagaaagccagacaaaaacttctagcagctatagatgatatagac
agacctaagagataa
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