Heterocephalus glaber (naked mole-rat): 101719180
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Entry
101719180 CDS
T02812
Symbol
Rad50
Name
(RefSeq) RAD50 double strand break repair protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03440
Homologous recombination
hgl03450
Non-homologous end-joining
hgl04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101719180 (Rad50)
03450 Non-homologous end-joining
101719180 (Rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101719180 (Rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hgl03032
]
101719180 (Rad50)
03400 DNA repair and recombination proteins [BR:
hgl03400
]
101719180 (Rad50)
DNA replication proteins [BR:
hgl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101719180 (Rad50)
DNA repair and recombination proteins [BR:
hgl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101719180 (Rad50)
BRCA1-C complex
101719180 (Rad50)
NHEJ (non-homologous end-joining)
MRX complex
101719180 (Rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
101719180
NCBI-ProteinID:
XP_004836669
UniProt:
A0A0P6J401
LinkDB
All DBs
Position
Un
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGECIAVQRSMVCSQKSKKTEFKTLEGIISR
IKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQAQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLMSSKEI
IKSYENELEPLENRLEEIEHNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELDKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIQARDSLIQSLATHLELEGFEHGPFSDRQIKNFHRLVRERQEQEAETAKKLMNDFEE
KETLKQKQIDEIRDKKTGLGRIMELKSEILSKKQNELKSVKYELQQLEGSSDRILELDQE
LTKAEHELSKAEKNSNIETLKTEVINLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHISNELKRKEEQLSNYEDKLFDVCGSQDFESDLDRLKEDIEKSSKQRAMLA
GATAVYSQFITQLTDENESCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTELELK
KKEKRRDEMLGLVPMSQNIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNKEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQIATNLQRRQQLEEQTVELSTEVQS
LHREIKDAKEQVNPLETALERFQQEKEELVNKKQASNKMAQDKLNDIKEKVKNIHGYVKN
IENYVQDGKDDYKKQKETELNTVIAQLSECDKQKEKINKEMGTMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQRLKEMGQMQVLQMKSEHQKLKVNLDDIKRNRDLALGRQKG
YEEEIIRFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLIITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVRCSVTSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagcccgctcacaattttggttggacccaatggggcg
gggaagacgaccatcatagaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagacgtgagagcc
cagattcgtctacagtttcgtgatgtcaatggagaatgtatagctgtgcagcgatctatg
gtgtgttctcagaagagcaaaaagacagaatttaaaaccttggaaggcatcatttccaga
ataaagcatggtgaaaaggtcagtctcagctctaagtgtgcagaaattgaccgagaaatg
ataagtgctcttggggtttctaaatctgtgctaaacaatgtcattttctgtcaccaagaa
gactctaattggcctttaagcgaaggaaaggctctgaagcaaaagtttgatgaaattttt
tctgcaacaaggtatatcaaagccttggaaacactccgtcaggtacgtcaggcgcaaggt
cagaaagtgaaagaatgtcaaacagaactgaaatacctgaagcaaaacaaggaaaaagct
tgtgaaattcgtgatcagattactagtaaggaggcccaattaatgtcttcaaaggaaatc
atcaaatcctatgaaaatgaacttgagccattggagaatcgtctagaagaaattgagcat
aatctctctaaaataatgagacttgataatgaaattaaagccttggaaagccgaaaaaag
caaatggagaaagataacagtgaactagaacagaaaatggaaaaggtttttcaaggtact
gatgagcaacttaatgacttatatcacaatcatcagagaacagtaagggagaaagaaagg
agattagtagactgtcagcgtgaactggataaattaaataaagaatctaggcttctcaat
caagaaaagtcagaactacttgttgaacaaggccgcctacagctacaagcagatcggcat
caagaacatatccaagctagagattcgttaattcagtcattggcaacacacctggaattg
gagggctttgaacatggaccattcagtgatagacagattaaaaattttcacagactagtg
agagagagacaagaacaggaagcagaaactgctaagaagctgatgaatgactttgaagaa
aaagaaactctgaaacaaaaacagatagatgagataagagataagaaaacaggacttgga
agaataatggagctaaaatcagaaatcctaagtaagaagcaaaatgagctgaaaagtgtg
aagtatgaattacaacagttggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacatgagttaagcaaggctgagaaaaacagcaatatagaaacccta
aaaacagaagtgataaaccttcagaatgagaaagcagacctagacaggaccttgcgtaaa
ttggaccaggagatggagcagttaaatcatcacacaacaacccgtacccagatggagatg
ctaactaaagacaaagctgacaaagatgaacaaatcagaaagataaaatctaggcatagt
gatgagttaacttcactcttggggtattttcctaacaaaaaacagcttgaagattggctt
catagtaaatcaaaagaaattaatcagaccagggatagactcgccaaattgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataagtaatgagctaaaaagaaaggaagaa
cagttgtccaactatgaagacaagctatttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaggatattgaaaaatcttcaaaacagcgagctatgctggct
ggagccacagcagtttactctcagttcattactcagctaacagatgaaaacgagtcatgt
tgccctgtctgtcagagagtttttcaaacagaggctgaattacaagaagtcatcagtgat
ttgcaatctaagctgcggcttgctcctgataaactcaagtcaacagagttagagctaaag
aaaaaagaaaagcgtcgagatgaaatgctggggcttgtgcccatgagccaaaacataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaacagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcttgggtacaataatgcct
gaggaagaaagtgcgaaagtatgtctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaaactacagggaatagat
ttggatcgaactgttcaacaagtaaacaaggaaaaacaagaaaaacaacacaagttagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacaaata
caacacttaaaaagtaccacaaatgaacttaaatcagagaaacttcagatagccactaat
ttgcagcgtcgtcagcagcttgaggagcaaactgtggaattatccactgaagttcagtct
ttacacagagagataaaggatgctaaagagcaagtaaaccctttggaaacagcgttggaa
aggttccaacaagaaaaagaagaattagtcaacaaaaaacaagcgagcaacaaaatggca
caggataaactgaatgatatcaaagagaaggttaaaaatattcatggctatgtgaaaaac
atagagaattatgttcaggatggaaaagatgactataagaagcaaaaagaaactgaactt
aatacagtaatagctcaactaagtgaatgtgacaaacaaaaagaaaagataaataaagaa
atgggaaccatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagagagaaaacaa
cgtttgaaagaaatgggtcaaatgcaggttttgcagatgaaaagtgaacatcagaagtta
aaagtgaaccttgatgatataaaaagaaatcgcgatttggcattggggcgacagaaaggt
tatgaggaagaaattattcgttttaagaaagaactccgagaacctcagtttcgggatgct
gaagaaaagtatagagaaatgatgattgtcatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaattattcgtgatctttggcggagtacctatcgtggacaagatatt
gaatacatagaaatccgctctgatgctgatgagaatgtatcagcctctgataaaaggcgg
aattataattaccgagtggtgatgctgaaaggagatacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtgttggcctccctcatcatccgcctggcactggctgaaaca
ttctgcctgaactgtggcatccttgctttggacgagccaacgaccaatcttgaccgagaa
aacattgaatcccttgcacatgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctgataatcactcacgatgaagattttgtggagctcctgggacgttct
gaatatgtggaaaaattctacagaattaagaagaacatcgatcagtgttcagagattgtg
agatgcagtgttacctccctgggatcctacgttcattag
DBGET
integrated database retrieval system
