Heterocephalus glaber (naked mole-rat): 101719630 Help Entry 101719630         CDS       T02812                                  Symbol Prpf19 Name (RefSeq) pre-mRNA processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl03040   Spliceosome hgl04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:hgl00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101719630 (Prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101719630 (Prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hgl03041]     101719630 (Prpf19)    04121 Ubiquitin system [BR:hgl04121]     101719630 (Prpf19)    03400 DNA repair and recombination proteins [BR:hgl03400]     101719630 (Prpf19) Enzymes [BR:hgl01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101719630 (Prpf19) Spliceosome [BR:hgl03041]  Complex B   Other components    Prp19 complex     101719630 (Prpf19)  Complex C    Prp19-CDC5 complex     101719630 (Prpf19) Ubiquitin system [BR:hgl04121]  Ubiquitin ligases (E3)   U-box type E3    101719630 (Prpf19) DNA repair and recombination proteins [BR:hgl03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     101719630 (Prpf19) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR41 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st U-box Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 PROPPIN Beta-prop_Nup120_160 Beta-prop_ACSF4 Cytochrom_D1 Beta-prop_DCAF12 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_VPS8 zf-Nse Beta-prop_LRRK2 DUF1830 Tricorn_2nd ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  101719630 NCBI-ProteinID:  XP_004874327 UniProt:  A0A0P6JDG2 LinkDB All DBs Position Un AA seq 504 aa AA seqDB search MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTQEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPSTSCVQ VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG VAFGHHAKFLASTGMDRSLKFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtccctgatctgctccatctccaatgaggtcccagagcacccgtgcgtgtcccccgtg tccaatcacgtgtacgagcggcggctcatcgagaagtacatcgcggagaatgggaccgac cccatcaacaaccagccgctctccgaggagcagctcatcgacatcaaagttgctcacccg atccggcccaagcctccctcggccaccagcatcccagccatcctgaaagccctgcaggac gagtgggatgccgtcatgctgcacagcttcaccctgcgccagcagctgcagaccacccgc caggagctgtcgcatgcgctgtaccagcacgacgccgcctgccgcgtcattgcccggctc accaaggaagtcactgccgcccgagaagctctggcaaccctgaagccgcaggctggcctc atcgtaccccaggctgtgcccagctcccagccgagtgttgtgggtgcaggtgagcccatg gatctgggtgagctggtgggaatgactcaggagatcatccagaagctgcaagacaaggcc acggtgctgaccacggagcggaagaagagagggaagacagtgccggaggagctggtgaag ccggaggagctcagcaagtaccggcaggtggcatcgcatgtggggctgcacagtgccagc atccctgggatcctcgccctggacctctgcccctccgacaccaacaagatcctcactggc ggggcggataagaacgtggtcgtgtttgataagagctctgagcaaatcctggccaccctc aaaggccacaccaagaaggtcaccagtgtggtgtttcacccttcccaggagctcgtgttc tcggcctccccggacgccaccatccggatctggtcggtccccagcacctcctgcgtccag gtggtgcgggcccacgagagcgccgtgaccggcctgagcctgcacgccacgggcgactac ctcctgagctcctccgacgaccagtactgggccttctccgacatccagacgggccgcgtg ctcaccaaggtgacggacgagacctccggctgctccctcacctgcgcgcagttccacccc gacggcctcatcttcggaacggggaccatggactctcagatcaagatctgggacctgaag gagcgcaccaatgtggccaacttccccggccactcgggccccatcaccagcatcgccttc tccgagaacggctactacctggccacggcggctgacgactcctccgtgaagctgtgggac ctgcgcaagctgaagaacttcaagacgctgcagctggacaacaacttcgaggtgaagtcc ctgatcttcgaccagagtggcacctacctggctctcggaggcacagacgtgcagatctat atctgcaagcagtggacggagatcctgcacttcacagagcacagcggcctgaccacgggg gtggcctttgggcaccacgccaagttcctggcgtccacaggcatggacaggagcctcaag ttctacagcctgtag

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