Heterocephalus glaber (naked mole-rat): 101719821
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Entry
101719821 CDS
T02812
Symbol
Mex3d
Name
(RefSeq) mex-3 RNA binding family member D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101719821 (Mex3d)
04121 Ubiquitin system [BR:
hgl04121
]
101719821 (Mex3d)
Enzymes [BR:
hgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101719821 (Mex3d)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101719821 (Mex3d)
Ubiquitin system [BR:
hgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101719821 (Mex3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4_2
zf-C3HC4
Prok-RING_4
RING_XB3-XBAT31
KH_DEAH11_2nd
DNA_gyraseA_C
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101719821
NCBI-ProteinID:
XP_004866136
LinkDB
All DBs
Position
Un
AA seq
649 aa
AA seq
DB search
MRRSDVRLEPGGEGLSPSHFRVQGRGAKGKHLLRSVCGGLVTLFLAEARQVPRLHSAEEA
APRPSPEPDDAAAALRLALDQLSALGLGRAGAPGTDGADGGEPEPAPPDGCEALPRVEPD
GSPPAPPPPAPDVFAGFAPHPAALGAPALLAEPLSVIGSRKKSVNMTECVPVPSSEHVAE
IVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSLIRAS
RGKAGGLPGAAPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRD
KEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDSGPDSDFHANGTDVCLDLLGATAGLW
AKAPHPGRRPPAATATGGLRGDNALGAPDAFYAGGRVGPPGPDPGPASPYSSSGNGGFTF
AGDSTGTPAPEDCDFGFDFLALDLTVPTAATIWAPFERAPPPLPTFSGCAAVNGTPGPPP
AGARRGSGTATPRHSPTLPEPGTGSGLGLELPLARRGAPDPVCTLPWRPPHGTLPPFSSG
TGFSAPTSLDASASDGNRKSSGTTSAPSAPAVPGPPTAALARECVVCTEGEAMAALVPCG
HNLFCMDCAVRICGRSQPECPACRTPATQAIRVGAVSQRPSCDTSVPDK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggagtgatgtgaggctggaacccggaggggaggggctgtcgccctcacacttc
cgggtccagggcagaggggccaaagggaagcacctacttcgaagtgtgtgtgggggactc
gtcaccctcttcttggcagaggctcgccaggtcccccgactgcacagcgccgaagaggcc
gcgccccggccgtcgcccgagcccgacgacgcggccgccgcgctgcgcttggcgctggat
cagctgtcggcgctggggctcgggcgtgcgggggccccgggcaccgacggcgcggacggc
ggggagcccgagcccgcgccccccgacgggtgcgaggcactgccgcgggtggagccggac
gggagcccccccgcgccgccgccgcccgcgcccgacgtgttcgcgggcttcgccccgcac
cccgccgccctgggtgccccggcgctgctggctgagccgctgagcgtgatcggcagccga
aagaagagcgtgaacatgaccgagtgcgtgccggtaccgagctccgagcacgtcgccgag
atcgtggggcgccagggctgcaagatcaaggcccttcgcgccaagaccaacacatacatc
aagactccggtgcgcggggaggagccggtgttcatcgtgaccggccgcaaagaggatgtg
gagatggccaagcgggagatcctgtcggccgccgagcacttctccctgatccgggcctct
cgcggcaaggcaggtggactgccgggtgccgccccagggccccccaacctgccgggacag
accaccatccaggtgcgcgtgccctaccgtgtggtgggcttggtggtggggcccaagggc
gccaccatcaagcgcatccagcagcggacacacacctacatcgtgacacccgggcgtgac
aaggagcccgtgttcgcggtgacggggatgcccgagaacgtggaccgcgctcgcgaggag
atcgaggcgcacatcacgctgcgcacgggtgccttcacggactcgggcccggacagcgac
ttccacgccaatggcaccgacgtctgcctagacctgctgggcgccaccgccggactctgg
gctaaggcccctcacccggggcggcggccccccgcagccacagccactggcgggctccgc
ggagacaatgccctgggcgcacccgacgccttttacgcaggcggccgagtggggccacca
gggccagacccgggccccgccagcccctacagcagctccggcaatgggggtttcacgttc
gccggggatagcacggggactcccgcgcccgaggactgcgactttgggtttgacttcctg
gcccttgacctcactgtgcccaccgcggccaccatctgggcacctttcgagcgcgccccg
ccccccctgcccaccttcagtggctgtgcagccgtcaacgggacccccgggccacctccg
gcgggggcgcggcgaggcagcgggacggccacccctcgccactcgcccacgctgcccgag
cccggcactggcagtggcctgggcctggagctccctctggcacgcaggggcgccccggac
ccagtgtgcacgctcccttggcgacccccacatggcaccctgccgcccttttccagtggc
actggcttctctgcacccacctcgctggacgcgagcgcttccgatggcaaccgcaagtcc
tcagggacaacctctgcaccctcggcgcccgcagtccccggcccgcccaccgccgccctg
gcccgcgagtgcgtggtgtgcaccgagggcgaggccatggctgcgctggtcccctgcggc
cacaacctcttctgcatggactgcgccgtccgcatctgtggccgcagccagcctgagtgt
cctgcctgccgcacaccagccacgcaggccattcgcgtgggggcggtcagccagcggccc
agctgtgacacctcagttcctgacaagtga
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