Heterocephalus glaber (naked mole-rat): 101721421
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Entry
101721421 CDS
T02812
Symbol
Lrfn1
Name
(RefSeq) leucine rich repeat and fibronectin type III domain containing 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hgl04515
]
101721421 (Lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
hgl04990
]
101721421 (Lrfn1)
Cell adhesion molecules [BR:
hgl04515
]
Immunoglobulin superfamily
SALM family
101721421 (Lrfn1)
Domain-containing proteins not elsewhere classified [BR:
hgl04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
101721421 (Lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
101721421
NCBI-ProteinID:
XP_004859157
UniProt:
G5BJE4
LinkDB
All DBs
Position
Un
AA seq
775 aa
AA seq
DB search
MAPGPFASVLLSPTPAALPFLLLLWAGASRSQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAPGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRKVEPAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
DSTAERRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDSRRGKGTSRSPPRVSHVCSQTNGAGAQPAAQPAQ
DRYEALREVAPGREVTVPAAAAVAVEAKATAAEATSMEPEVVLGRSLGGSATSLCLLPSE
ETSGEESRAVTGPRRSRSGALGPPASAPPTLALVPGGASARPRPQQRYSFDGDYGALFQS
HSYPRRARRTKRHRSTPHLDGAGGGAAGEDGDLGLASARARLAFTSTEWMLESTV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggcccctttgcctcggtgctcctctcgccgacacctgctgccctgcccttc
ctgctgctgctctgggccggggcatctcgcagtcagccgtgtccgggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgctaagaccggcttgctcttcgtgccg
ccggccatcgacaggcgcgtggtggagctgcggctcaccgacaacttcatcgctgctgtg
cgccgccgagactttgccaacatgaccagcctggtgcatctcactctctcccggaacacc
atcggccaggtggcacccggagccttcgcagacctccgcgccctccgcgccctgcacctc
gacagcaaccgtctggctgaggtgcgcggtgaccagcttcgcggcctgggcaacctccgc
cacctgatccttggcaacaaccagatccgcaaggtggagcccgccgcctttgacgccttc
ctgtccaccgtggaggacctggatctgtcctacaataacttggaggccctgccgtgggag
gcggtgggccagatggtgaacctcaacacactcacgctggaccacaatctcatcgaccac
atcgccgaggggaccttcgtgcagctgcacaagctggtgcgcctggacatgacctccaac
cgcctgcacaaactcccgcctgacgggctcttcctgaggtcccagggtggtggacccaag
ccacccactccgctgactgtcagcttcggcggaaacccactgcactgcaactgtgagctg
ctctggctgcggcggctgacccgggaggacgacctggagacctgcgccaccccagagcac
ctcactgaccgttacttctggtccatccccgaggaggagttcctgtgtgaacccccgctg
atcacgcggcaggcaggaggccgggccctggtggtagagggccaggcggtcagcttgcgc
tgccgggcggtgggggaccctgaacccgtggtgcattgggtggcacctgatgggcggctg
ctgggaaactccagccggacccgcgtccggggggatgggacactggatgtgaccattacc
accctgcgggatagtggcactttcacttgcattgcttccaatgctgcgggggaagccacg
gcgcccgtggaggtgtgcgtagtacctttgccactgatggcgcccccaccagctgccccg
ccgcctctcactgagcccggctcctctgacatcgccacaccaggtagacctggtgccaac
gattccactgctgagcgcaggctggtggcggcggagctcacctccagctcagtgcttatc
cgctggcccgctcagaggccggtgcctggcatccgcatgtaccaggtccagtacaacagc
tcggcggatgactccctggtctacaggatgatcccgtccaccagccagaccttcctggtg
aatgatctggcagcaggccgcgcctacgacttgtgcgttctggcagtctatgacgatggg
gccaccgccctgccagccacaagagtggtgggctgcgtgcagttcaccactgctggggat
cctgcgccttgccgtccgttgagggcccatttcttgggcggcaccatgatcatcgccatc
gggggcgtcattgtcgcctcagtcctcgtttttattgttctgctcatgattcgctacaag
gtgtacggcgacggggacagccgccgcggcaagggcacctccaggtcgcccccgagggtc
agccacgtgtgctcccagaccaatggcgctggcgcgcaaccagctgctcagcccgcgcag
gaccgctacgaggcgctgcgtgaggtggcgccaggacgcgaggtgaccgtgccagctgct
gctgccgtcgccgtcgaggccaaggccactgcggccgaggcaacttccatggaaccagag
gtggtgctgggacgctcgctgggcggctcagccacctcgctgtgcctgctgccatccgag
gaaacttctggggaggagtctcgagcagtgacagggcctcggaggagccgttctggggct
ctggggccgccagcgtcagcgcccccgactctagctctggttcccgggggagcctcggcc
cgccccaggccgcagcagcgctactccttcgacggggactacggggcgctcttccagagc
cacagttacccgcgccgcgcccggcggacaaagcgccaccgttccacgccgcacctggac
ggggccggagggggcgcggccggggaggatggagacctggggctggcctccgccagggcg
cgcctggcctttaccagcaccgagtggatgttggagagtaccgtgtga
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