KEGG   Heterocephalus glaber (naked mole-rat): 101722321
Entry
101722321         CDS       T02812                                 
Symbol
Atg13
Name
(RefSeq) autophagy related 13
  KO
K08331  autophagy-related protein 13
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl04136  Autophagy - other
hgl04140  Autophagy - animal
hgl04211  Longevity regulating pathway
hgl05010  Alzheimer disease
hgl05014  Amyotrophic lateral sclerosis
hgl05016  Huntington disease
hgl05017  Spinocerebellar ataxia
hgl05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101722321 (Atg13)
   04136 Autophagy - other
    101722321 (Atg13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    101722321 (Atg13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101722321 (Atg13)
   05014 Amyotrophic lateral sclerosis
    101722321 (Atg13)
   05016 Huntington disease
    101722321 (Atg13)
   05017 Spinocerebellar ataxia
    101722321 (Atg13)
   05022 Pathways of neurodegeneration - multiple diseases
    101722321 (Atg13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hgl04131]
    101722321 (Atg13)
   03029 Mitochondrial biogenesis [BR:hgl03029]
    101722321 (Atg13)
Membrane trafficking [BR:hgl04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    101722321 (Atg13)
   Atg1 complex
    101722321 (Atg13)
Mitochondrial biogenesis [BR:hgl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    101722321 (Atg13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 101722321
NCBI-ProteinID: XP_012930361
UniProt: A0A0P6JAL4
LinkDB
Position
Un
AA seq 550 aa
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKISTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAIGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPRHPCIYRIAGEDAGG
VYPSVEDSQEVCTTSFSTSPPSQCVFTVAKAHFQTPPPVVPDILRVPMAGLAFSHQLSSS
RLSYLPAVLGLGSADLAYPVVFPAGLNAPHPHQLMVPGKEGGVPVTPSQPTHGAQADQER
LATHTLSDGPHCPATPSSSEGTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDTDPMVNPPDSPEAVSPLHGSLHSEGSSEGSSGNPHDDFVMV
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgaaaagatttcaactcgt
tcatcttcatccccaacgggttcagactggtttaacttagcgatcaaagatatccccgag
gtcacccatgaagcaaagaaggcactggcagggcagctgcctgccattgggcggtccatg
tgtgtggaaatctcgctcaagacctcagagggagattccatggagctggagatttggtgt
cttgaaatgaatgaaaagtgtgacaaagaaatcaaagtttcctacaccgtgtacaacaga
ctgtccctgctgctcaagtcccttcttgctatcacgagggtgacaccagcctacaggctc
tccagaaagcaggggcatgaatatgtcatactgtacaggatatactttggggaagttcag
ctgaatggcttgggagaaggctttcagacagttcgagttgggacagtgggcacccctgtg
ggcaccatcactctttcttgtgcttacagaatcaacttggcattcatgtccaccaggcaa
tttgagaggacccctcctatcatgggtatcattatcgatcactttgtggaccgcccctac
cccagctcttctcccagacacccctgcatctacaggatcgctggtgaggatgctggcgga
gtgtacccgtcggtggaagactctcaggaagtgtgcaccacttcattttccacctccccg
ccatcgcagtgtgtgtttactgtcgcaaaggcacattttcagacccctcctcctgtggtg
ccggacattctgagggtccccatggcaggactggccttttcccatcaactctccagctct
cgcctttcctatctgcctgctgtcctgggccttggatcagctgacctggcttacccagta
gtgttccctgctggtctaaatgctccacaccctcaccagctgatggttcctgggaaggag
gggggagtgcccgtcactcccagccagccaacccatggtgcccaggctgaccaggagaga
ttggcgacccacaccctttcggatgggccccactgccccgccacaccttccagcagtgag
ggcaccgaaaccgtctccaacagcagtgagggccgggcctccccccacgatgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
acgagcttggacataccctttgccatgtttgctcccaaaaacttggagctggaggatact
gaccctatggtgaaccccccagactccccagaagctgtgtctcctctccacggcagcctg
cactccgagggctccagcgagggcagcagcggcaacccccacgatgactttgtcatggtc
gacttcaaaccagctttttctaaagacgacatccttccgatggacttggggaccttctac
cgtgagtttcagaacccccctcagctaagcagcctctccatagacattggagcccagtcc
atggcagaagacttggactccctacccgaaaagctggctgtgcacgaaaagaacgttcga
gaattcgatgcctttgtcgaaaccctgcagtaa

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