Heterocephalus glaber (naked mole-rat): 101723956
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Entry
101723956 CDS
T02812
Symbol
Clp1
Name
(RefSeq) cleavage and polyadenylation factor I subunit 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101723956 (Clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101723956 (Clp1)
Enzymes [BR:
hgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
101723956 (Clp1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101723956 (Clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
101723956
NCBI-ProteinID:
XP_004869828
UniProt:
G5BLJ7
LinkDB
All DBs
Position
Un
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggaggccaatgacgacaagaagcccacgaccaaattcgaactagagcgagaa
acagaactgcgctttgaggtggaggcgtcgcagtcggttcagctggagctgttggctggc
atggcagagatctttggcaccgagctgacacgaaacaagaagttcacctttgacgccggg
gccaaggtggctgttttcacttggcatggctgctccgtgcagctgagtggccgcaccgag
gtggcttacgtctccaaggacacccctatgttgctttatctcaacactcacacggccctg
gagcagatgcggaggcaggctgaaaaggaagaggagcgtgggccccgggtgatggttgtc
ggccccacagatgtgggcaaatccacggtgtgtcgcctgctgctcaactatgcagtgcgt
ttgggacgccgtcctacttacgtggagctggatgtgggccagggctctgtgtccatccct
ggtaccatgggagccctgtacattgagcggcctgcagatgtggaagaaggtttctccatc
caggccccgctggtgtatcattttggctccaccactccggggaccaacatcaagctgtat
aataagattacatctcgcctagcagatgtgtttaaccagcggtgtgaggtgaaccgaagg
gcttccgtgagcggctgcgttataaatacttgcggctgggtcaagggctcgggctaccag
gcgctggtgcacgcagcctctgccttcgaggtggacgtggtcgtggtgctggaccaggag
cggctgtacaatgagctgaagcgggacctgcctcacttcgttcgcacggtgctgctcccc
aagtctgggggcgtggtggagcgctctaaggacttccggcgggagtgcagggacgagcgc
attcgtgagtatttctacggcttccggggctgcttctatccccatgccttcaatgtcaaa
ttttctgatgtgaaaatctacaaggtgggcgcgcccaccatccccgactcctgtctcccg
ctgggcatgtcccaggaggacaaccagctcaagctggtgcccgtcaccccgggccgggac
atggtgcaccacctgctgagcgtcagcacggctgagggcaccgaggagaacctctcggag
accagcgtggccggcttcatcgtggtgaccagcgtggacctggagcaccaggtgttcact
gtgctctccccggcgccccgccctctgcccaagaacttcctgctcatcatggacatccgg
ttcatggatctcaagtag
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integrated database retrieval system
