Heterocephalus glaber (naked mole-rat): 101724114
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Entry
101724114 CDS
T02812
Symbol
Scn10a, NaV1.8
Name
(RefSeq) sodium voltage-gated channel alpha subunit 10
KO
K04842
voltage-gated sodium channel type X alpha
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hgl04040
]
101724114 (Scn10a)
Ion channels [BR:
hgl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101724114 (Scn10a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
CcmD_alt
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
101724114
NCBI-ProteinID:
XP_012928472
LinkDB
All DBs
Position
Un
AA seq
1947 aa
AA seq
DB search
MEFPFGSLETTNFRRFTPESLAEIEKQIAAHRAEKEVRDKHREQKNEEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRLSATQALWLFSPFNLIR
RSAIKVSVHSWFTSFITFTIVANCVCMTRSDLPEKIEYVFTVIYTFEALIKILARGFCLN
EFAYLRDPWNWLDFSVITLAYVGTATELKGFSGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLTDVTILTVFCLSVFALVGLQLFKGNLKNKCIRNGTTVLQAPNCSSRMYEYATKP
GTSDPLLCGNGTGAGLCPDGYVCLKTCDNPDFNYTSFDSFAWAFLSLFRLMTQDSWERLY
QQTLRASGKMYMVFFVIVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQEAL
EMLRKEQEVLAALGMDTASLHSHSGSPLASKSAGERRHGMKSRVSEGSTEDSKSPQSEPY
NQRRMSFLGLTSGRRRASHGSVFHFRAPGRDVSFPDGITDDGVFHGDHESHRDSLMLGRS
ARQQGPFLRSPLPQPPNPGSQHGEEGPPTLPTVELPPGATEVSAFDSGQRKSFLSTEYLN
EPFRAQRAMSVVSIMTSVIEELEESEHRWPPCLTSLAQKYLIWECCPTWVKLKAVLFELV
TDPFAELTITLCIVVNTVFMAMEHHGMSSAFETMLQIGNIVFTIFFTAEMVFKIIAFDPY
YYFQKKWNIFDCIIVTVSLLELSVVRKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGN
SVGALGNLTIILAIIVFIFALVGKQLLGEAYFTQQAKLTLPGDREPRWHMMDFFHSFLII
FRILCGEWIENMWACMEVSEKPICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPE
DDGEVNNLQVALARLQVFGRQTRQALRSFFRRPCLLPRPKVEPQLAAKSPLSSPKAENHI
AAEAAPGSPRALPLLRGHRDEHSDLIADPNLWVSVPIAEGESDLDDSEDDGEQGAPSSWQ
EVTPEGQEQLQQAGRHEDYLTPRSPGSGTSSEDLAPYLGEKWKGKGAPPVPAEGVDDTSS
SEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCLRHCPCCKVNTTKFPWAMGWQLRK
TCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYADRVFTFIFVFEMLL
KWVAYGFKKYFTNAWCWLDFLIVNISLISLIAKILKYSDMESIKALRTLRALRPLRALSR
FEGMRVVVDALVGAIPSIVNVLLVCIIFWLIFSIMGVNLFAGKFGRCINHTNGEFDLVNW
TVVNNMTECENQNYTGSFFWVNVKVNFDNVMMGYLALLQVATFKGWMDIMYAAVDSREVN
SQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKYQGFLFDIVTRQAFDVSIMVLICLNMITMMVETDDQSKE
KTRVLGKINQFFVAVFTGECVLKMFALRHYYFTNGWNVFDFIVVFLSIGSLIFSAILTSL
EGYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSI
FGMSSFPHVKEEAGIDDMFNFKTFANSMLCLFQITTSAGWDGLLSPILNTGPPFCNGTRG
DCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMFYETWEK
FDPEATQFITFSALSDFADTLSGPLQIPKPNQNILIQMDLPLVPGDKVHCLDILFAFTKK
VLGESGELDTLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKAYRSYMQHHS
LVLSNSSGVPRVEEDAESLPDEGFVALMANENYVLPDESETASATSFPPSYDSVTRGLNG
RVNMSTSSSMQNEDEAMSKEATASGLQ
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctggaaactaccaacttccggcggttcactccggagtca
ctggctgagattgagaagcaaattgctgcccaccgggcagaaaaggaagtcagagataaa
cacagggagcagaagaacgaagaagagaaacctcggccccagctggacttgaaggcctgc
aatcagctgcccaaattctatggtgagctcccagcagaactggtcggggagcccctggag
gatctagaccctttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggcttagtgccactcaggctctatggcttttcagtcccttcaaccttatcaga
agatcagccatcaaagtgtctgtccactcgtggttcacttcatttattacattcactatt
gtggccaattgtgtgtgcatgactcgaagtgatcttccagagaaaattgagtatgtcttc
actgtcatttacaccttcgaagccttgataaagatactggcaagagggttttgtctgaat
gagttcgcctacctgcgagatccctggaactggctagactttagcgtcattaccctggcg
tatgtcggcacggcaacagaactgaaaggattctcaggcttgaggacattcagagttctt
agagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtgggggctttgatc
cactcggtaaggaagctgactgatgtgaccatcctcactgtcttctgcctgagtgtcttt
gccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgcatcaggaatggc
acaactgtcctgcaggcccccaattgttcatctagaatgtacgagtatgctactaagccg
ggcacttctgatcccttactgtgtggcaacggaactggcgcaggcctgtgccctgatggt
tatgtctgcctcaaaacctgtgacaacccagactttaactacaccagctttgattccttt
gcttgggctttcctctccctgttccgcctcatgacgcaggactcctgggaacgcctctac
cagcagaccctcagggcctccggaaaaatgtacatggtctttttcgtgattgtcatcttc
ctgggatccttctacctggtcaacttgatcctggctgtggtcaccatggcgtacgaagag
cagaaccaggccaccattgctgaaattgaagcaaaggagaagaagttccaggaggccctg
gagatgctccggaaggagcaagaggtcctggcagcgctggggatggacacagcctctctg
cattcccacagtgggtccccattagcctctaaaagtgctggtgagagaaggcatggaatg
aagtcaagagtgtcagagggctccactgaagatagcaaatcaccccagtcagagccttac
aaccagcgcaggatgtctttcctaggccttacttccgggagacgccgtgccagccatggt
agtgtattccacttccgagcccctggccgagatgtctcattccctgatgggatcacagat
gatggagtctttcatggagaccacgaaagccatcgggactccctgatgctgggcaggagt
gctagacagcaaggccccttcctcaggagcccactgcctcagccccctaaccctggctcc
cagcatggagaagagggaccccccacactgcccactgtggagcttccccctggagccact
gaagtctcggcatttgattcgggacaaaggaagtctttcttgtcaacagaatacttgaat
gaacccttccgagcccagagagcaatgagtgtcgtcagtatcatgacttccgtcatcgag
gaactcgaggagtctgaacacaggtggccaccctgcctgaccagtttggctcagaagtat
ctgatctgggagtgctgccccacatgggtaaagctcaaggcagttctctttgagctggtg
acagaccccttcgcagagctcaccatcaccctgtgcatcgtggtcaacacagtcttcatg
gccatggagcaccatggcatgagctccgccttcgaaaccatgctgcagattggcaacatc
gtctttaccatattttttactgctgaaatggtcttcaaaatcattgccttcgacccctac
tattacttccagaagaagtggaatatcttcgactgcatcatcgtcactgtgagcctgctg
gagctgagtgtggtcaggaagggaagcctgtctgtgctgcggaccttccgcttgctgcga
gtcttcaagctggccaagtcctggcccaccctgaacacactcatcaagatcatcggcaac
tcggtgggggctctggggaacctgaccatcatcctggccatcattgtcttcattttcgcc
ttggttggcaagcagctcctcggggaggcctacttcacccaacaggcaaagctgacgttg
ccgggtgacagggagccccgctggcacatgatggacttctttcactccttcctcatcatc
ttccggatcctctgtggggagtggatcgagaacatgtgggcctgcatggaagttagcgag
aaacccatatgcctcatccttttcttgaccgtgatggtactagggaacctggtggtgctc
aacctgttcattgccttgctgctgaactctttcagtgccgacaacctcacagcacctgag
gacgacggggaggtgaacaacctgcaggtggccctggcacgcctccaggtgtttggccgc
caaaccaggcaggcccttcgaagcttcttccgcaggccctgcctgctccctaggcccaag
gtggagccacagctggcagcaaaatccccactctccagccccaaggctgagaaccacatt
gctgccgaggctgctccaggaagccccagagcactgccacttctcagaggccacagggat
gagcacagtgaccttatcgctgatcctaacttgtgggtctctgtgcccattgcggagggc
gaatctgacctcgatgactcagaggatgatggagagcagggtgctccaagctcatggcag
gaagtgaccccggaaggacaggagcagctacagcaagctgggaggcatgaggactacctg
acacccaggagcccaggctctgggacatcctctgaggacctggctccatacctgggtgag
aagtggaaaggcaagggtgctcccccagttcctgcagagggggtggatgatacaagctcc
tctgagggcagcacggtggactgcccagatcctgaggagatcctgaggaagatcccggag
ctggcagatgacctggaagaacccgatgactgcttcacagaaggctgccttcgccactgt
ccctgctgcaaagtgaatactaccaagtttccatgggccatgggctggcagttgcgtaag
acctgctatcgcatcgtggagcacagctggtttgagagctttatcatcttcatgatcctg
ctcagcagtgggtctctggcctttgaagactgttacctggaccagaagcccacagtgaag
gccctgctggagtacgctgacagggtgttcaccttcatctttgtgtttgagatgctgctc
aagtgggtggcctatggcttcaaaaaatacttcaccaatgcctggtgctggctggacttc
ctcattgtgaatatctcactgataagcctcatagcgaagatcctgaaatattctgatatg
gagtccatcaaagcccttcggaccctccgcgccctgcggcccctaagggctctgtctcga
ttcgaaggcatgcgggtggtggtggatgccctggtaggtgccatcccatccatcgtgaat
gtcctccttgtctgcatcatcttctggctcatcttcagcatcatgggcgtgaacctcttt
gcggggaagtttgggaggtgcatcaaccacaccaatggagaatttgatcttgtgaactgg
acagttgtgaataacatgactgaatgtgagaatcaaaactatactggcagcttcttctgg
gtcaatgtgaaagtcaactttgataatgttatgatgggttacctcgcacttcttcaggtg
gcaacctttaaaggctggatggacattatgtatgcagctgtcgattcccgagaagtcaac
agtcagcccaagtgggaggacaacgtgtacatgtacttgtactttgtcatcttcatcatt
tttggtggcttcttcacactgaatctctttgttggggtcataattgacaacttcaatcaa
cagaaaaaaaagttagggggccaggacatcttcatgacagaggagcagaagaagtactac
aatgccatgaagaaattgggctccaagaagccccagaagcccatccctcggcccctgaac
aagtaccagggctttctctttgacatcgtgactaggcaagcttttgacgtcagcattatg
gtcctcatttgcctcaacatgatcaccatgatggtggagacggacgaccagagtaaagaa
aagacaagagttctaggcaaaatcaaccagttctttgtggctgtattcacgggcgagtgt
gtcctgaagatgtttgccttaaggcattactacttcaccaacggctggaacgtgttcgac
ttcatcgtggttttcctctccattgggagtttgatattttctgcaattcttacatcactt
gaaggttacttctccccaacgctcttccgagtcatccgcctggcccgaattggccgcatc
cttagactgatccgggcagccaaggggatccgtacgctgctcttcgccctcatgatgtcc
ctgcctgcactcttcaacatagggctgctgctcttccttgtcatgttcatctactctatc
tttgggatgtccagctttccccatgtgaaggaggaggctggcattgatgacatgttcaac
ttcaagacctttgccaacagcatgctgtgcctcttccagatcaccacatcagctggctgg
gatggcctcctcagccccatcctcaacacagggccccccttctgcaatggcacaagagga
gactgtgggagcccagctgtgggcatcctcttcttcaccacctacatcatcatctccttc
ctcatcgtggtcaacatgtacattgcagtgattctggagaatttcaatgtagccacagag
gagagcacagagcccctgagtgaagatgactttgacatgttctatgagacctgggagaag
tttgacccagaggccacccagttcattaccttttctgccctctcagactttgcagacacc
ctctctggccctctgcaaatcccaaaaccaaatcagaatatattaatccagatggacctg
cccttggtccctggagataaggtccactgcctggacatcctttttgctttcaccaagaag
gtgctgggagaatctggggagttggacactctgaaagcaaatatggaagagaaatttatg
gcaactaatctttcaaaggcatcctatgagccaatagcaaccaccctccggtggaagcaa
gaagacatttcagccactgtcattcaaaaggcctaccggagctatatgcagcatcactcc
ttggtactctccaactcctctggtgtgcctagggttgaggaggatgctgagtcacttcca
gatgaaggttttgttgcattaatggcaaatgaaaattatgtgctcccagatgaatctgaa
actgcatctgccacatctttcccaccatcctatgacagtgtcactagaggccttaatggc
agagtcaacatgagcacatctagctcaatgcaaaatgaagatgaagccatgagtaaggag
gcaactgcctctggacttcagtga
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integrated database retrieval system
