KEGG   Heterocephalus glaber (naked mole-rat): 101724280
Entry
101724280         CDS       T02812                                 
Symbol
Thoc6
Name
(RefSeq) THO complex 6
  KO
K13175  THO complex subunit 6
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101724280 (Thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hgl03019]
    101724280 (Thoc6)
   03041 Spliceosome [BR:hgl03041]
    101724280 (Thoc6)
Messenger RNA biogenesis [BR:hgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101724280 (Thoc6)
Spliceosome [BR:hgl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101724280 (Thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 NBCH_WD40 Beta-prop_IP5PC_F EIF3I Beta-prop_IFT122_1st WDR54 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 101724280
NCBI-ProteinID: XP_004864762
UniProt: A0AAX6Q4K6 A0A0P6J3T6
LinkDB
Position
Un
AA seq 341 aa
MERATPLAVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRQLLSAGDGEVKAWLWAEILKKGCKEMWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRERS
PEVLSGSEDGAVRLWDLRTAKEAQIIEVYKHEECSRPHNGRWIGCLATDADWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGHCINHWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgtgctacgccactcgcggtgcctctgggtcaggccgaggtgtttcaggccctg
cagcggctgcacatgactatcttctcccagagtgtctcaccctgtgggaagttcctggca
gctggcaacaactatggacagattgccatcttcagcttgtctgctgctttgagttcagag
gccaaagaggaaagcaagaagcctgtggtgaccttccaagcccatgatgggcctgtctac
agcatggtctccactgatcgacaactgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcagagatcctcaagaagggctgtaaggaaatgtggcgtcgtcagcccccatac
aggaccagcctggaagtgccagagatcaatgctttgctgctcgttcccaaggagaattcc
ctcatcctggctgggggagactgtcaactgcacactatggacctggaaactggaaccttc
actcgggctctccgaggccacacagactatatccattgcctggcacttagagagcggagt
cctgaggtgctgtcaggcagcgaagatggggctgtgcggctttgggacctccgcacagcc
aaggaagcacagataatcgaggtttataagcatgaggagtgctccaggccgcacaatggg
cgctggattggatgcttggcaactgatgcagactggatggtctgtggagggggcccagcc
ctcaccctctggcacctgcggtcctccacacccaccaccatcttccccatgcgggcacca
cagaagcatgtcaccttctaccaggacttgattctgtcagctggccagggtcattgcatc
aaccactggcagctgagtggggagctcaaggcccaggtgcctggctcttccccggggctg
ctcagcctcagcctcaaccagcagccagcagcacccgagtgcaaggtcctgactgctgca
ggcaacagctgccgggtggatgtcttcaccaacctgggctaccgagccttctccctgtcc
ttctga

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