Heterocephalus glaber (naked mole-rat): 101724550
Help
Entry
101724550 CDS
T02812
Symbol
Srrm1
Name
(RefSeq) serine and arginine repetitive matrix 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101724550 (Srrm1)
03015 mRNA surveillance pathway
101724550 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101724550 (Srrm1)
03041 Spliceosome [BR:
hgl03041
]
101724550 (Srrm1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101724550 (Srrm1)
Spliceosome [BR:
hgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101724550 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
101724550
NCBI-ProteinID:
XP_004850654
UniProt:
A0AAX6PG72
LinkDB
All DBs
Position
Un
AA seq
914 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPMPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSSRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSPSPPPKQRSSPV
AKRRSPSLSSKHRKGSSPSRATRETRSPQPTKRHSPSPRPRAPQTSSPPPVRRGTSASPQ
RRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPS
PVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHK
KHKKEKAAAAAAGAPITPAAIAATTTSAQEETEAATEPKKETESEAEDNLDDLEKHLREK
ALRSMRKAQVSPQS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaaactactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagaa
tttatgggagaactgtggcctctgctgttaagtgcacaagaaaacatcgctggaatccct
tctgctttcttagaactgaagaaagaagaaataaaacagagacagattgaacaagaaaaa
ttggcatcgatgaaaaagcaagatgaagacaaagataaaagggataaagaagaaaaagaa
agcagcagagaaaagagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagtcggagtccttcccctgcgccagaaaagaaggaaaaaact
ccagaactccctgaaccttcagtgaaagtaaaagaaccttcagtacaagaggccacatct
actagtgacatcctaaaagttcccaagcctgaacccatgccagaacctaaagaaccttct
ccagaaaaaaattccaagaaagaaaaggaaaagacccggccaagatctcggtcacgttcc
aaatcaaggtcccggacccgttctcgctctccttctcatactcgaccaagacggcgccat
aggtcccgatcgagatcatactcacctagaaggcggccaagcccaagaaggagaccatct
cctcgaagaagaactccaccaagacgaatgcctcctcctccaaggcatagaaggagtaga
tctccagtaagacgaagaaggcgttcatcagcatccttgtctgggagtagctcatcatca
tcttcatctcgttcccggtcaccaccaaagaaacctcctaagaggacatccagcccccct
cgaaaaactcgtaggttatctccatcagcgagtcctccaagacgaaggcacaggccatcg
cctccagctactccaccaccaaaaactcgtcattccccaacaccccagcaatcaaaccgt
acaagaaaaagtcgtgtttctgtgtctccagggagaacttcaggtaaagtgacaaaacat
aaaggtactgagaaaagagaatcaccatcaccagcaccaaagcctagaaaagtagagtta
tctgaatctgaagaagataaaggcggcaaaatggctgcagccgattctgtgcagcagaga
cgccagtacagacgacagaaccagcagtcttcatctgactctggctcctcctcttcctct
gaagatgagcgacccaagcgatcccatgtgaaaaatggtgaggtcgggaggcggcggaga
cattccccttcccggagtgcatctccgtcaccacgaaagcgccaaaaagagacttcccct
cggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtagtagacggaggaga
agtccctcccctccccccaccagaagacgccgatctccttctccagctcctcctcctcgg
cggcgcagatctcccacaccaccacctcgacggaggactccctctcctccccctcgtcgg
cgctcaccttccccgagaagatactctcctcccatacagaggaggtactctccttctcca
cctccaaagagaagaacggcttcgcccccaccccctcctaagagaagggcatcgccatcc
ccaccaccaaagcgccgggtctccccctctccacctcccaaacaaagaagctccccagtt
gccaagagacgctcaccttctctctcatcaaagcataggaaagggtcttccccaagccgt
gctactagggagacccggtcaccacaaccaaccaaacggcattctccctcaccgcggcct
cgagctcctcagacctcaagtcctccacctgttcgaagaggaacatcggcatcaccccaa
agaaggcagtccccatctccaagtaccaggcccattagaagagtctccagaactccagaa
cctaaaaagacaaaaaaggctgcctcaccaagtccacagtctgtaagaagggtttcctcc
tctcgttctgtctctggatctcctgagccagcagctaaaaagcccccagcacctccatcc
cctgtccagtctcagtcaccctctacaaactggtcaccagcggtgccagtcaaaaaggct
aaaagcccaacgccaagcccatcaccagccaggaattcagatcaagaaggaggtgggaag
aaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaaacacaagaagcacaaa
aaacacaagaaggaaaaggctgctgctgcagccgctggggctcctataacccccgcagcc
attgctgccacaaccacatcagcacaggaagaaaccgaggcagccacagagccgaagaag
gagaccgaaagtgaagctgaagataaccttgatgacttagagaagcacctgcgggaaaag
gctctgagatccatgcggaaggctcaagtgtccccacagtcctag
DBGET
integrated database retrieval system
