Heterocephalus glaber (naked mole-rat): 101724733
Help
Entry
101724733 CDS
T02812
Symbol
Crnkl1
Name
(RefSeq) crooked neck pre-mRNA splicing factor 1
KO
K12869
crooked neck
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101724733 (Crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101724733 (Crnkl1)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101724733 (Crnkl1)
Spliceosome [BR:
hgl03041
]
Complex B
Other components
Prp19-related factors
101724733 (Crnkl1)
Complex C
101724733 (Crnkl1)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101724733 (Crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
NRDE-2
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
101724733
NCBI-ProteinID:
XP_004840950
LinkDB
All DBs
Position
Un
AA seq
705 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVPGARQVFERWMEWQP
EEQAWHSYINFELRYKEVERARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYER
AVEFFGDEHMDEHLYVAFARFEENQKEFERVRVIYKYALDRIPKHEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANV
PPIPEKRHWKRYIYLWINYALYEELEAKDPERTRQVYRATLELIPHKKFTFAKMWLYYAQ
FEIRQKNLPFARRALGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQ
LLQRTQHVKVWISFAQFELSSGKEGSITKCRQIYEEANKTMRNCEEKEERLMLLESWRSF
EDEFGTASDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEAAEQDPDKDINEKLQDHPMKIITYINYPGHLSA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccacagcggccgggaagcagcgaattcccaaggtggccaaggtaaaaaac
aaagccccagctgaagtacagataactgctgaacaactcttaagagaagccaaggaaaga
gaacttgagcttctgccacctccacctcagcagaagatcacagatgaagaagaattaaac
gattacaagctaaggaaaaggaagacttttgaagataacataagaaaaaacaggactgtg
attagtaactggataaagtacgcacaatgggaagaaagtctaaaggaaattcaaagggct
cgatccatatacgagcgtgctttagatgtagactatcgaaatatcacactgtggctgaaa
tatgcagaaatggaaatgaagaaccgccaagtcaaccacgcccgaaacatctgggaccgg
gccataacaactctgccgagagtcaaccaattctggtacaagtatacgtacatggaggag
atgctgggcaatgtgccgggagcccggcaagtgtttgagcgctggatggaatggcagcct
gaggagcaggcctggcactcctacatcaactttgagctgaggtacaaggaggtggagcgg
gcccgcaccatctatgagcgctttgtccttgtgcaccctgatgtgaaaaactggatcaag
tacgcccgcttcgaagagaaacatgcttactttgcccatgcccggaaagtatacgagaga
gcggtggaattctttggagatgaacacatggatgaacacctttatgttgcttttgccaga
tttgaagaaaatcagaaagaattcgaaagggtgcgagtcatctacaagtacgctctggat
agaatcccaaaacatgaggcccaagaactctttaaaaactacaccatctttgagaagaag
ttcggcgacaggcggggcattgaagacatcatcgtgagcaagcggaggttccagtatgag
gaggaagtgaaggctaatccacacaattacgatgcatggttcgattacttgcgcttggtg
gaaagtgacgccgaagctgagactgtgcgtgaagtctatgagagagcgattgccaacgtc
ccgcccatcccagagaagcggcactggaagcgctacatctacctgtggatcaactatgca
ctctatgaggagctggaagcaaaggaccctgaaaggacaagacaagtttatcgagccact
ttggaactaattccacacaaaaagttcacatttgccaaaatgtggttatattatgcacag
tttgaaataagacagaaaaatttaccatttgccagacgagctttggggacggccataggc
aaatgtccaaagaacaagttatttaaaggttacatagaattggagttgcagcttcgagaa
ttcgacagatgccggaagctttatgaaaagttcctggaatttggacctgaaaattgtacc
tcctggattaagtttgccgagttagagacaatccttggtgatattgacagagcacgggcc
atctatgaattggctatcagccagccacgtctagacatgccggaggtgctttggaaatca
tacattgattttgaaattgagcaggaagaaactgaaagaacacgaaatctttaccgacag
ctgcttcagcggacacaacatgtcaaggtatggatcagttttgctcagtttgaattgtct
tccgggaaagaaggaagcatcaccaaatgcagacaaatctatgaagaagctaacaaaacc
atgcggaactgtgaagaaaaggaagagaggcttatgctgctggaatcctggcgaagcttt
gaagatgaatttggaaccgcatcagataaagagagagtggacaaactaatgccagagaaa
gtcaaaaagagacgaaaagttcaggcggatgatgggtctgacgcaggctgggaagaatac
tatgattacatctttcctgaggatgctgccaaccagcccaacctcaagctgctggccatg
gccaaactctggaagaaacagcagcaggaaaaggaggctgctgagcaggatccagataag
gacatcaatgagaagctccaagatcatccaatgaaaataataacgtacataaactaccca
ggacatctatctgcctaa
DBGET
integrated database retrieval system
