KEGG   Heterocephalus glaber (naked mole-rat): 101725609
Entry
101725609         CDS       T02812                                 
Symbol
Arpc1b
Name
(RefSeq) actin related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl04144  Endocytosis
hgl04517  IgSF CAM signaling
hgl04530  Tight junction
hgl04666  Fc gamma R-mediated phagocytosis
hgl04810  Regulation of actin cytoskeleton
hgl05100  Bacterial invasion of epithelial cells
hgl05132  Salmonella infection
hgl05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    101725609 (Arpc1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101725609 (Arpc1b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    101725609 (Arpc1b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101725609 (Arpc1b)
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    101725609 (Arpc1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101725609 (Arpc1b)
   05135 Yersinia infection
    101725609 (Arpc1b)
   05100 Bacterial invasion of epithelial cells
    101725609 (Arpc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hgl04131]
    101725609 (Arpc1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hgl04812]
    101725609 (Arpc1b)
Membrane trafficking [BR:hgl04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    101725609 (Arpc1b)
Cytoskeleton proteins [BR:hgl04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     101725609 (Arpc1b)
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WDR55 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR3_2nd Beta-prop_WDR35_TULP_N eIF2A Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_HPS5 Rax2 EIF3I RMC1_N PEP5_VPS11_N WDR90_beta-prop_4th SH3_3
Other DBs
NCBI-GeneID: 101725609
NCBI-ProteinID: XP_012926091
UniProt: A0AAX6QRK5
LinkDB
Position
Un
AA seq 392 aa
MAYHSFLVEPISCHAWNKHRTQIAICPNNHEVHIYEKSGVSWSKVHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGSTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGACDFKCRIFSAYIKEVEERP
APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADAEKKMAVVTL
ASETLPLLALTFITENSLVAAGHDCFPVLFTYDGAAGKLSFGGRLDVPKQNSQRGLTARE
RFQNLDKKASSEGGKAAGTGLDSLHKNSVSQISVLSGGKAKCSKFCTTGMDGGMSIWDVK
GHLLQGSLAKTQRDTSSLQEHLSMHHHLEGQA
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggcctaccacagcttcctggtggagcccatcagctgccatgcctggaacaagcaccgc
acacagattgccatctgccccaacaaccatgaagtgcacatctacgagaagagtggggtc
agctggagcaaggtgcatgagctcaaggagcacaacgggcaggtgacaggcatcgactgg
gcccctgagagtaaccgcatcgtgacttgtggcacggaccgaaacgcctatgtgtggacg
ctgaaaggcagcacgtggaagcctacacttgtcatccttcggatcaaccgtgccgcccgc
tgtgtgcgctgggctcccaatgagaacaagtttgctgtgggcagcggctcccgcgtcatc
tccatctgctattttgagcaggagaatgactggtgggtgtgtaagcacatcaagaagccc
atccgctccaccgtgctcagcctggactggcatcccaacaacgtgctcctggccgctggc
gcctgcgacttcaagtgcaggatcttctcagcctacatcaaggaggtggaggagaggcca
gcccccaccccctggggctccaagatgccctttggggaactgatgtttgagtccagcagc
agctgcggctgggtgcacggcgtgtgtttctcagccagcggcagccgagtggcctgggtc
agccatgacagcaccgtgtgccttgctgatgccgagaagaagatggccgtggtgaccctg
gcctctgagacgctgccgctgctggccctcaccttcatcactgagaacagtctggtggca
gcgggccacgactgctttcctgtgctgttcacctacgatggtgctgctgggaagctcagc
ttcggcgggcggctggatgtgcccaagcagaactctcagcgcggcctcacagcccgggag
cgtttccagaacctcgacaagaaggcgagctcagagggcggcaaagctgcaggcaccggc
ctggactcgctgcacaagaacagtgtcagccagatctccgtgctcagtgggggcaaggcc
aagtgctcgaagttctgcaccacaggcatggacggcggcatgagcatctgggatgtaaag
gggcatctgctgcaagggtctctggctaagacacagcgagatacttccagcctacaggaa
cacttatccatgcatcatcacctagaaggccaggcatga

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