Heterocephalus glaber (naked mole-rat): 106007520 Help Entry 106007520         CDS       T02812                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl03018   RNA degradation Brite KEGG Orthology (KO) [BR:hgl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     106007520  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hgl03019]     106007520 Enzymes [BR:hgl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      106007520 Messenger RNA biogenesis [BR:hgl03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      106007520   mRNA degradation factors    3'-5' decay     Ski complex      106007520 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk Helicase_C DEXQc_Suv3 ResIII DUF3516 PhoH Motif Other DBs NCBI-GeneID:  106007520 NCBI-ProteinID:  XP_004846985 UniProt:  A0AAX6P9N0 LinkDB All DBs Position Un AA seq 1246 aa AA seqDB search MIETERLVLPPPDPLNLPLRAVELGCTGRWELLNVPGPPESTLPHGLPPCAPDLQQEAEQ LFLSSPAWLPLHDVEHAARKWQRETDPWSLLAAVGAPVPSDLQAQRHPTTGQVLGYKEVL LENTNLSATTSLSLRRPPGPVSQSLWGNPTQYPFWPGGMDEPSLMDLSSREEHEEELDFE KDLLTVPPGFKKGVDFAPQDRPAPAPGLLSLSCLLEPLDLGGGDVEENEAVGQTEGPRGD AASASPCRAPLARASSLEDLVLREAATAPPEPPQPPLQEQWAVPVDVTSPVGDFYRLIPH PAFQWAFEPDVFQKQAILHLEKHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPI KALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIF DEVHYINDAERGVVWEEVFIMLPDHVSVILLSATVPNALEFADWIGRLKRRQIYVISTLT RPVPLEHHLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPG RQAGPAQDRGVYLSLLASLRARAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHL FLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFAT ETFAMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRGLDPTGTVVLLCKAR VPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPFRKDSKAH EQTLAELTKKLGSLEEPDVTGQLADLPDYYGWGEELVETRSRIQQRILESVNGLKSLSVG RVVVVKSQEHHNALGVILQVSSSSASRVFTTLVLCDKPESQGLQDRGLATPTADVPHPDD LVGFKLFLPEGPCDHTVAKLQPADVAAITTKVLRVHGEKILEDFSKRQQPKFRKDPPLAA VATAVQELVRLAQACPAGPPTLDPVSDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRF SAQYVKLRERMRIQKEMARLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQTPGDPGDHLPSTLKQGVERVRA VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ NT seq 3741 nt NT seq  +upstreamnt  +downstreamnt atgatcgagacagagcgactcgtgctgcctcccccggatcccctgaatctgccccttcgg gctgtggaactgggatgcacggggcgctgggagctgttgaatgtgcctggtcctccagaa agcacccttccccatggcctccctccatgtgccccagatctgcagcaagaagcagagcag ttgtttctgtcctcccctgcctggctgcccctgcatgatgtggagcatgcagctcgaaaa tggcagagggagacagatccctggtccctcctggctgctgtcggggccccagtcccatcg gaccttcaggcccaaagacacccgaccacaggccaggtcctgggctacaaggaggtcctg ctggagaacacgaacctgtcggccacgacctccttgtctctccgccggcctccagggcca gtctcccagtctctgtgggggaatcccacacagtatcctttctggccaggtgggatggac gagcccagcctcatggacctgagctctcgggaggagcatgaggaggagctagacttcgag aaagacctcctcactgtcccacctggcttcaagaagggtgtggactttgccccccaggat cgcccagcccccgcacccgggttactcagcctcagctgcctgctggagccgctggatttg ggtgggggcgacgtggaggagaatgaagcagtgggacagacagaaggacccagaggggac gctgcttccgcctctccctgcagggctcccttggctcgagcgagcagtttggaggacctg gtgttgagggaagctgccacagccccgccggagcctccccagcctccgctgcaggagcag tgggccgtgcctgtggacgtcacctccccggtgggtgacttctaccgcctcattccccac ccagccttccagtgggcgtttgagccagacgtgtttcagaaacaggccatcctgcacctg gagaaacacgactctgtgttcgtcgcagcccacacctctgcggggaagaccgtggtggcc gaatacgccattgccctggctcagaaacacatgacgcgcaccatctacacctcgcccatc aaggccctgagcaaccagaagttccgggacttccggaacacatttggggacgtggggctg ctcacgggggacgtgcagctgcaccctgaggcttcctgcctcatcatgacgacggagatt ctccgctccatgctgtacagcggctcggatgtcatccgggacctggagtgggtcatcttc gatgaggttcactacatcaatgacgccgagcgcggggtcgtgtgggaggaggtgttcatc atgctccccgaccacgtctccgtcatcctcctgagcgccactgtccccaacgccctggag tttgccgactggattgggcgactgaagcgccgtcagatctacgtgatcagcacgctcaca cggcctgttcccctggagcaccatctgttcacgggaaacagccccaagacccagggggag ctcttcctgctgctggactctcgaggggccttccacaccaaggggtactacgcagccgtg gaggccaagaaggagaggatgagcaaacacgcgcagaccttcggggccaagcagcccggg cgccaggctgggcccgcgcaggaccgtggcgtgtacctgtccctgctggcctccctccgc gcccgggcccagctgcccgtggtggtgttcaccttctcccggggccgctgtgacgagcag gcctcgggcctcacctcgcttgacctcaccacaagctcggagaagagtgagatccacctc ttcctgcagcgctgcctggcgcgtctccgaggctccgaccgccagctgccccaggtcctg cacatgtcggagctcctgcaccgcggcctgggcgtgcaccacagtggcatcctgcccatc ctcaaggagatcgtggagatgctgttcagccgtggcctggtcaaggtcctgtttgccact gagacctttgccatgggtgtgaacatgccagcccgcaccgtggtgttcgactccatgcgc aagcacgatggctccgccttccgggacctgctccccggggagtacgtgcagatggccggc cgcgcgggccggaggggcctggaccccacaggcactgtcgtgctgctctgcaaggcccgc gtgcccgagatggccgacctgcaccgcatgatgatggggaagccatcccagctgcagtcc cagttccgcctcacatacactatgatcctcaacctgctgcgggtggatgcactcagggtg gaggacatgatgaagaggagcttctccgagttcccgttccgcaaggacagcaaggcccac gagcagacgctggctgaactgaccaagaagctggggtccctggaggagcccgacgtgact ggccagctggctgatctgcctgactattatggctggggggaggagctggtagagacccgg agcaggatccagcaacgcatcctggagtctgtgaatgggttgaaatctctctcggtggga cgggtggtggtcgtgaagagtcaggagcatcacaacgcactgggggtgatcctgcaggtc tcttccagctccgccagcagagtcttcacaaccctggtcttgtgtgataagcccgagtct cagggcctgcaggacagggggctggccactcccactgcggatgtgccccaccccgacgac cttgtgggatttaagctgttcctgcctgaagggccttgtgaccacactgtggccaagctc cagccggcagacgtggctgccatcaccaccaaggtgctccgggtgcacggagagaagatc ttggaggatttcagcaagaggcagcaaccaaaattcaggaaggaccctcccctggcggcc gtggccactgctgtccaggagctggtgcgactggctcaggcctgcccggcggggcccccc accctcgaccccgtcagtgacctgcagctgaaggatgtgtccgtggtcgagggggggctc cgggcccggaagctggaggagctaatccggggggctcagtgtgtgcacagcccccggttt tccgcccagtacgtgaagctgcgggagcgcatgcggattcagaaggagatggcgcggctg cgcttcctgctgtccgaccagtcgctgctgctgctgcctgagtaccaccagcgagtagag gtgctccgaaccctgggttatgtggacgaggcaggcactgtgaagctggcgggccgggtg gcgtgtgccatgagcagccatgagctactcctcaccgagctcatgttcgacaatgcactg agtgccctgcggcccgaggagatcgctgccctgctgtctggcctggtctgccagaccccc ggggaccctggggatcacctcccgagcaccctcaagcagggggtggaacgtgtccgggct gtggccaagaggatcggtgaggtccaggtggcctgcggcctgaaccagaccgtggaggaa tttgtgggggagctgaatttcgggctggttgaggttgtgtacgagtgggcccggggtatg cccttctcagagttggcggggctctcggggactcctgaaggcctggtggtccgctgcatc cagcgcctggctgagatgtgtcgctcgctgcgaggggcagcccgcctggttggggagcct gtgctgggggccaagatggagacagcagccaccctgctacgccgagacatcgtctttgcc gccagtctttacactcagtga

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