KEGG   Heterocephalus glaber (naked mole-rat): 106009531
Entry
106009531         CDS       T02812                                 
Name
(RefSeq) cadherin-23-like
  KO
K06813  cadherin 23
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hgl03037]
    106009531
   04515 Cell adhesion molecules [BR:hgl04515]
    106009531
Cilium and associated proteins [BR:hgl03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   106009531
Cell adhesion molecules [BR:hgl04515]
 Cadherins
  Major cadherins
   106009531
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th PCDH15_12th TFIIB_C_1
Other DBs
NCBI-GeneID: 106009531
NCBI-ProteinID: XP_012928294
LinkDB
Position
Un
AA seq 1382 aa
MVTATDQCPIVSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFDVTEGQPGPRVWTFLAH
DRDSGPNGQVEYSVVSGDPLGEFVISPVEGVLRVRKDMELDRETIAFYNLTICARDRGVP
PLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVTHILASDADSGCNALLTFN
ITSGNWERAFRINATTGIVTVNWPLDRERIPEYKLTISVKDNPENPRIARRDFDLLVVSL
TDENDNHPLFTEGTYQAEVMENSPAGSVIVKSPLNRELVATYEVTLSVIDNASDLPERSV
SVPNAKLTVNILDVNDNTPQFKPFGITYYTERILEGATPGTTLIAVAAVDPDKGLNGLIT
YSLLDLVPPGYVQLEDPSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPIYLEI
VDVNDNNPIFDQPFYQEAILEDVPVGTVILMVTATDADSGSFALIEYSLGDGEGKFAINP
TTGDIYVVSSLDREKKDHYILTALAKDNPGDVDSNRRENSVQVVIQVLDVNDCRPQFSKS
QFSTSVYENEPAGTSVITMLATDQDEGSNGQLSYSLEGPGMEAFHVDVDLGLVTTQRPLQ
SYERFNLTVVATDGGEPQLWGTTMLLVEVIDVNDNRPIFMRPPNGTILHIREEIPLRSNV
YEVYATDKDEGLNGAVRYSFLKTAGNRDWEFFTIDPISGLIQTAQRLDREKQAVYSLILV
ASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPHGTLVGNVTG
AVDTDEGSNAIVYYFIAAGDEAKNFHLQPDGHLLVLRDLDREREAVFSFIVKASSNRSWT
PPRRPAPALDLVTDLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALD
ADIGNNSLVFYGILAIHYFRSLANDSEDVGQVFTMGSVDGILRTFDLFMAYSPGYFVVDI
MAQDLAGHNDTAIIGIYILRDDQRVKIVINEIPDRVRGFEEEFIRLLSNITGAIVNTDDV
QFHVDKKGRVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNVLDVQP
AISVRLPDDMSALQMAIIVLAILLFLAAMLFILMNWYYRTVHKRKLKAIVAGSAGNRGFI
DIMDMPNTNKYSFDGANPVWLDPFCRNLELAAQAEHEDDLPENLSEIADLWNSPTRTHGT
FGREPAAVKPDDDRYLRAAIQEYDNIAKLGQIIREGPIKGSLLKVVLEDYLQLKKLFAQR
MVQKASSCHSSISELIQTELDKEPGDHSPSQGSLRFRHKPPMELKGPDGIHVVHGSTGTL
LATDLNSLPEDDQKGLGHSLETLTTAEATAFERNARTESAKSTPLHKLRDVIMESPLEIT
EL
NT seq 4149 nt   +upstreamnt  +downstreamnt
atggtcaccgccacagaccagtgccccatcgtgtcccaccgcctcacctcgaccaccacg
gtgctggtgaatgtgaatgacatcaatgacaatgtgcctaccttcccccgggactacgag
ggaccgtttgatgtcactgagggccagccagggccccgagtgtggaccttcctggcccac
gaccgggattcaggccccaacgggcaggtggagtacagcgtggtgtccggcgaccctctg
ggggagttcgtgatctcccccgtggagggggtgctgcgggtacggaaggacatggagctg
gaccgggagaccatcgccttctacaacctgaccatctgtgcccgtgaccggggggtgcct
ccactcagctccacaatgctggtggggatccgggtgctggacatcaatgacaacgaccca
gtgctgctgaacctgcccatgaacatcaccatcagtgagaacagccccgtctccagcttt
gtcacccacatcctggccagcgatgctgacagcggatgcaacgccctccttactttcaac
atcacctcgggcaactgggagcgggccttccggatcaatgccacaacagggatcgtcacc
gtgaactggcccctggaccgcgagcggatcccggagtacaagctcaccatttccgtgaag
gacaacccggagaacccacgcatagccaggagggattttgacttgctggtggtctctctt
acggacgagaatgacaaccaccccctcttcacagagggcacctaccaggcggaggtgatg
gagaactctcccgcagggtctgtaatagtgaagtctcctctgaaccgagagctggttgcc
acctatgaggtcacgctctcagtgattgacaacgccagcgacctaccagagcgctctgtc
agtgtgccaaatgccaagctgacagtcaacatcctagatgtcaacgacaacacgccccag
ttcaagcccttcgggatcacctactacacagagcggatcctggagggggccaccccgggc
accacgctcattgccgtggcagccgtggaccctgacaagggcctcaatgggctgattacc
tacagcctgctggacctcgtgccccccggctatgtccagctggaagacccctcagcaggg
aaagtcattgccaaccggacggtggactatgaagaggtgcattggctcaactttaccgtg
agggcctcagacaatgggtccccaccccgggcagcagagatccccatctacctggagatt
gtggatgtcaatgacaacaaccccatctttgaccagcccttctaccaggaggccatctta
gaggatgtccctgtgggcacagtcatcctgatggtcactgctactgatgcagactcaggc
agctttgccctcatcgagtacagcctcggggatggggagggcaagtttgccatcaacccc
actacgggtgacatctatgtggtgtcctctctggaccgagagaagaaggaccactatatc
ctgactgccttggccaaagacaaccctggggatgtggacagcaaccgtcgagaaaactcg
gtgcaggtggtgatccaagtgctagatgtcaacgactgccggcctcagttctccaagtcc
cagttcagcacaagcgtgtatgagaatgagccggcaggcacctctgtcatcaccatgctg
gccactgaccaggacgagggctccaatgggcagctgtcctactcgcttgaaggccccggc
atggaggccttccacgtggatgtggacttgggcctggtgaccacgcagcggccactgcaa
tcctatgagagattcaacctgaccgtggtggccacagatggtggtgagccccaactctgg
ggcaccaccatgctcctggtggaggtcatcgacgtcaatgacaaccgccccatcttcatg
cgcccgcccaatggcaccatcctgcacatcagagaggaaatcccactgcgctccaacgtg
tacgaggtctacgctaccgacaaggatgaagggctcaacggggcggtgcgctacagcttc
ctgaagacggcgggcaaccgtgactgggagttcttcactattgaccccatcagcggcctc
atccagacggcacagcgcctggaccgcgagaagcaggctgtgtacagcctcatcttggta
gccagtgacctgggccagccagtgccatatgagaccatgcagccgctgcaggtggccctg
gaagacatcgacgacaatgaacctctcttcgtgaggcctcctaaaggcagcccccagtac
cagctgctgacggtgcctgagcactcaccccatggaaccctcgtgggcaatgtgacaggc
gccgtggacaccgatgagggctccaatgcaatcgtgtactacttcatcgcagctggcgat
gaggcgaagaacttccacctccagcctgatgggcacctgctggtgcttcgggaccttgac
cgggagcgagaagctgtcttctccttcattgtcaaggcctccagcaaccgcagctggacg
ccaccccgcagaccggccccggcccttgacctggtcaccgacctcaccctgcaggaggtg
cgcgtcgtgctagaggacatcaacgaccagccaccacgcttcaccaaggcagagtacact
gcaggcgtggccaccgatgccaaggtgggctcagagctcatccaggtgctggctctggac
gcagacatcggtaacaacagccttgtcttctatggcatcctggccatccactacttccgg
tccctcgccaacgactccgaggatgtgggccaggtcttcaccatggggagcgtggatggc
atcctgcgcacctttgacctcttcatggcctacagccctggctacttcgtggtggacatc
atggcccaagacctggcaggacacaacgacacggccatcattggcatctacattctgagg
gacgaccagcgcgtgaaaatcgtcattaacgagatccctgatcgtgtgcggggcttcgag
gaggagttcatccgcctgctgtccaacatcactggcgccattgtcaacaccgatgacgtg
cagttccacgtggacaagaaggggcgggtgaacttcgcacagacagagctgctcatccac
gtggtgaaccgtgacaccaaccgcatcctggatgtggaccgggtgatccagatgatcgat
gagaacaaggagcagctgcggaatctcttccggaactacaacgtcctggacgtgcagccc
gccatttccgttcggctgcctgatgacatgtctgccctgcagatggcgatcatcgtgctg
gccatcctcctcttcctggcggccatgctgttcatcctcatgaactggtactacaggacc
gtacacaagaggaagctcaaagccattgtggcgggttctgcagggaaccgtggcttcatc
gacatcatggacatgcccaacactaacaagtactcctttgatggagccaaccccgtgtgg
ctggatcccttctgccggaatctggagctggctgcccaggctgagcacgaggatgacctg
cccgagaacctgagtgagatcgctgacctgtggaacagccccacccgcacccacggaacc
tttgggcgtgaaccagcagcggtcaagcctgacgatgaccggtacctgcgggcagccatc
caggagtatgacaacattgccaagctgggccagatcattcgcgaggggcccatcaagggc
tcactgctgaaggtggtcctggaggattacctgcagctcaaaaagctctttgcacagcgg
atggtgcaaaaagcctcctcctgccactcctccatctccgagctgatccagacggagctg
gacaaggagccaggggaccacagcccaagccagggcagtctgcgcttccgccataagcca
cccatggagctcaagggacccgatgggatccacgtggtgcatggcagcacaggcacactg
ctggccaccgaccttaacagcctgcccgaggatgaccagaagggcctgggccactcactg
gagacactgaccactgcagaggccaccgcctttgagcgcaacgcccgcacagagtccgcc
aaatccacacccctgcacaagctccgagacgtgatcatggagagccccctggagatcaca
gagctgtga

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