Heterocephalus glaber (naked mole-rat): 106009531
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Entry
106009531 CDS
T02812
Name
(RefSeq) cadherin-23-like
KO
K06813
cadherin 23
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hgl03037
]
106009531
04515 Cell adhesion molecules [BR:
hgl04515
]
106009531
Cilium and associated proteins [BR:
hgl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106009531
Cell adhesion molecules [BR:
hgl04515
]
Cadherins
Major cadherins
106009531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
PCDH15_12th
TFIIB_C_1
Motif
Other DBs
NCBI-GeneID:
106009531
NCBI-ProteinID:
XP_012928294
LinkDB
All DBs
Position
Un
AA seq
1382 aa
AA seq
DB search
MVTATDQCPIVSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFDVTEGQPGPRVWTFLAH
DRDSGPNGQVEYSVVSGDPLGEFVISPVEGVLRVRKDMELDRETIAFYNLTICARDRGVP
PLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVTHILASDADSGCNALLTFN
ITSGNWERAFRINATTGIVTVNWPLDRERIPEYKLTISVKDNPENPRIARRDFDLLVVSL
TDENDNHPLFTEGTYQAEVMENSPAGSVIVKSPLNRELVATYEVTLSVIDNASDLPERSV
SVPNAKLTVNILDVNDNTPQFKPFGITYYTERILEGATPGTTLIAVAAVDPDKGLNGLIT
YSLLDLVPPGYVQLEDPSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPIYLEI
VDVNDNNPIFDQPFYQEAILEDVPVGTVILMVTATDADSGSFALIEYSLGDGEGKFAINP
TTGDIYVVSSLDREKKDHYILTALAKDNPGDVDSNRRENSVQVVIQVLDVNDCRPQFSKS
QFSTSVYENEPAGTSVITMLATDQDEGSNGQLSYSLEGPGMEAFHVDVDLGLVTTQRPLQ
SYERFNLTVVATDGGEPQLWGTTMLLVEVIDVNDNRPIFMRPPNGTILHIREEIPLRSNV
YEVYATDKDEGLNGAVRYSFLKTAGNRDWEFFTIDPISGLIQTAQRLDREKQAVYSLILV
ASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPHGTLVGNVTG
AVDTDEGSNAIVYYFIAAGDEAKNFHLQPDGHLLVLRDLDREREAVFSFIVKASSNRSWT
PPRRPAPALDLVTDLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALD
ADIGNNSLVFYGILAIHYFRSLANDSEDVGQVFTMGSVDGILRTFDLFMAYSPGYFVVDI
MAQDLAGHNDTAIIGIYILRDDQRVKIVINEIPDRVRGFEEEFIRLLSNITGAIVNTDDV
QFHVDKKGRVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNVLDVQP
AISVRLPDDMSALQMAIIVLAILLFLAAMLFILMNWYYRTVHKRKLKAIVAGSAGNRGFI
DIMDMPNTNKYSFDGANPVWLDPFCRNLELAAQAEHEDDLPENLSEIADLWNSPTRTHGT
FGREPAAVKPDDDRYLRAAIQEYDNIAKLGQIIREGPIKGSLLKVVLEDYLQLKKLFAQR
MVQKASSCHSSISELIQTELDKEPGDHSPSQGSLRFRHKPPMELKGPDGIHVVHGSTGTL
LATDLNSLPEDDQKGLGHSLETLTTAEATAFERNARTESAKSTPLHKLRDVIMESPLEIT
EL
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccgccacagaccagtgccccatcgtgtcccaccgcctcacctcgaccaccacg
gtgctggtgaatgtgaatgacatcaatgacaatgtgcctaccttcccccgggactacgag
ggaccgtttgatgtcactgagggccagccagggccccgagtgtggaccttcctggcccac
gaccgggattcaggccccaacgggcaggtggagtacagcgtggtgtccggcgaccctctg
ggggagttcgtgatctcccccgtggagggggtgctgcgggtacggaaggacatggagctg
gaccgggagaccatcgccttctacaacctgaccatctgtgcccgtgaccggggggtgcct
ccactcagctccacaatgctggtggggatccgggtgctggacatcaatgacaacgaccca
gtgctgctgaacctgcccatgaacatcaccatcagtgagaacagccccgtctccagcttt
gtcacccacatcctggccagcgatgctgacagcggatgcaacgccctccttactttcaac
atcacctcgggcaactgggagcgggccttccggatcaatgccacaacagggatcgtcacc
gtgaactggcccctggaccgcgagcggatcccggagtacaagctcaccatttccgtgaag
gacaacccggagaacccacgcatagccaggagggattttgacttgctggtggtctctctt
acggacgagaatgacaaccaccccctcttcacagagggcacctaccaggcggaggtgatg
gagaactctcccgcagggtctgtaatagtgaagtctcctctgaaccgagagctggttgcc
acctatgaggtcacgctctcagtgattgacaacgccagcgacctaccagagcgctctgtc
agtgtgccaaatgccaagctgacagtcaacatcctagatgtcaacgacaacacgccccag
ttcaagcccttcgggatcacctactacacagagcggatcctggagggggccaccccgggc
accacgctcattgccgtggcagccgtggaccctgacaagggcctcaatgggctgattacc
tacagcctgctggacctcgtgccccccggctatgtccagctggaagacccctcagcaggg
aaagtcattgccaaccggacggtggactatgaagaggtgcattggctcaactttaccgtg
agggcctcagacaatgggtccccaccccgggcagcagagatccccatctacctggagatt
gtggatgtcaatgacaacaaccccatctttgaccagcccttctaccaggaggccatctta
gaggatgtccctgtgggcacagtcatcctgatggtcactgctactgatgcagactcaggc
agctttgccctcatcgagtacagcctcggggatggggagggcaagtttgccatcaacccc
actacgggtgacatctatgtggtgtcctctctggaccgagagaagaaggaccactatatc
ctgactgccttggccaaagacaaccctggggatgtggacagcaaccgtcgagaaaactcg
gtgcaggtggtgatccaagtgctagatgtcaacgactgccggcctcagttctccaagtcc
cagttcagcacaagcgtgtatgagaatgagccggcaggcacctctgtcatcaccatgctg
gccactgaccaggacgagggctccaatgggcagctgtcctactcgcttgaaggccccggc
atggaggccttccacgtggatgtggacttgggcctggtgaccacgcagcggccactgcaa
tcctatgagagattcaacctgaccgtggtggccacagatggtggtgagccccaactctgg
ggcaccaccatgctcctggtggaggtcatcgacgtcaatgacaaccgccccatcttcatg
cgcccgcccaatggcaccatcctgcacatcagagaggaaatcccactgcgctccaacgtg
tacgaggtctacgctaccgacaaggatgaagggctcaacggggcggtgcgctacagcttc
ctgaagacggcgggcaaccgtgactgggagttcttcactattgaccccatcagcggcctc
atccagacggcacagcgcctggaccgcgagaagcaggctgtgtacagcctcatcttggta
gccagtgacctgggccagccagtgccatatgagaccatgcagccgctgcaggtggccctg
gaagacatcgacgacaatgaacctctcttcgtgaggcctcctaaaggcagcccccagtac
cagctgctgacggtgcctgagcactcaccccatggaaccctcgtgggcaatgtgacaggc
gccgtggacaccgatgagggctccaatgcaatcgtgtactacttcatcgcagctggcgat
gaggcgaagaacttccacctccagcctgatgggcacctgctggtgcttcgggaccttgac
cgggagcgagaagctgtcttctccttcattgtcaaggcctccagcaaccgcagctggacg
ccaccccgcagaccggccccggcccttgacctggtcaccgacctcaccctgcaggaggtg
cgcgtcgtgctagaggacatcaacgaccagccaccacgcttcaccaaggcagagtacact
gcaggcgtggccaccgatgccaaggtgggctcagagctcatccaggtgctggctctggac
gcagacatcggtaacaacagccttgtcttctatggcatcctggccatccactacttccgg
tccctcgccaacgactccgaggatgtgggccaggtcttcaccatggggagcgtggatggc
atcctgcgcacctttgacctcttcatggcctacagccctggctacttcgtggtggacatc
atggcccaagacctggcaggacacaacgacacggccatcattggcatctacattctgagg
gacgaccagcgcgtgaaaatcgtcattaacgagatccctgatcgtgtgcggggcttcgag
gaggagttcatccgcctgctgtccaacatcactggcgccattgtcaacaccgatgacgtg
cagttccacgtggacaagaaggggcgggtgaacttcgcacagacagagctgctcatccac
gtggtgaaccgtgacaccaaccgcatcctggatgtggaccgggtgatccagatgatcgat
gagaacaaggagcagctgcggaatctcttccggaactacaacgtcctggacgtgcagccc
gccatttccgttcggctgcctgatgacatgtctgccctgcagatggcgatcatcgtgctg
gccatcctcctcttcctggcggccatgctgttcatcctcatgaactggtactacaggacc
gtacacaagaggaagctcaaagccattgtggcgggttctgcagggaaccgtggcttcatc
gacatcatggacatgcccaacactaacaagtactcctttgatggagccaaccccgtgtgg
ctggatcccttctgccggaatctggagctggctgcccaggctgagcacgaggatgacctg
cccgagaacctgagtgagatcgctgacctgtggaacagccccacccgcacccacggaacc
tttgggcgtgaaccagcagcggtcaagcctgacgatgaccggtacctgcgggcagccatc
caggagtatgacaacattgccaagctgggccagatcattcgcgaggggcccatcaagggc
tcactgctgaaggtggtcctggaggattacctgcagctcaaaaagctctttgcacagcgg
atggtgcaaaaagcctcctcctgccactcctccatctccgagctgatccagacggagctg
gacaaggagccaggggaccacagcccaagccagggcagtctgcgcttccgccataagcca
cccatggagctcaagggacccgatgggatccacgtggtgcatggcagcacaggcacactg
ctggccaccgaccttaacagcctgcccgaggatgaccagaagggcctgggccactcactg
gagacactgaccactgcagaggccaccgcctttgagcgcaacgcccgcacagagtccgcc
aaatccacacccctgcacaagctccgagacgtgatcatggagagccccctggagatcaca
gagctgtga
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