Hylemonella gracilis: DW355_07630
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Entry
DW355_07630 CDS
T09883
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hgr
Hylemonella gracilis
Brite
KEGG Orthology (KO) [BR:
hgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgr03016
]
DW355_07630
Enzymes [BR:
hgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DW355_07630
Transfer RNA biogenesis [BR:
hgr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DW355_07630
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
QBK04660
UniProt:
A0A4P6UKK4
LinkDB
All DBs
Position
complement(1622043..1624142)
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AA seq
699 aa
AA seq
DB search
MFALFDEAGKFLAGRILSEADASLQVELDTGKRVKVKAANVLLKFEKPAPAALLAEAQPL
AEGIELDLAWEFAPEEDFGFAELAALYFQDPPTLTQQAAALLRLHEAPHYFRRAGKGRYK
KAPAEIIQQALAAIEKKRLLQIQIGEWAQQLAQGNCPAPIREQLYKILFKPDKNAPEYKA
VVEAARATQKAPLDLLQAAGAIDSPYQFHWRRFLFDNFPKGYGFPANLVAPEIKDELPTA
SVQAYSIDDSQTTEIDDALSVQGLGSGTVTVGVHIAAPGLAVQRGDAIDKLGRDRLSTVY
MPGYKITMLPDDVVQRYTLQEGQACPAVSLYVRFKEDTLELVDSATKLERVPIAHNLRHD
QLDGVVTEEWLSNPGFTPALPPEATSHAALLTPALRAELSFLHRLARHLKAGREIVRGKP
ETFNRPDYNFRLLGGAGEPQGQESVQIGVRQRGAALDLIVAEAMILANSSWGQWMAELGV
PAIYRSQASLAPGVKVRMGVKALPHAGIGVPSYAWSTSPLRRYTDMVNQWQIIACARHGR
TAALAAPFKPKDAELFAIISAFDAAYTTYNGYQATIERYWTLKYLAQQGITELDATVFKD
NLARADTLPLVLPVLGTQGLSRGARVRVKLGTIDEVALDVSGTVIARLDADANANGTEGD
LAETAEGEDDDSLAAGPIAIAVDVNEAPEAEGASPTSGT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcattgttcgacgaagccgggaagtttctcgccggccgcatcctttccgaggcc
gacgcctcgctccaggtggagctggacaccggcaagcgggtgaaggtcaaggcggccaat
gtgctgctgaaattcgagaaacccgcgccggccgcgctgctggccgaggcccagcccctg
gccgagggcatcgagctggacctggcctgggagttcgcccccgaggaggatttcggcttc
gccgagcttgcggccctgtacttccaggacccacccacattgacccagcaggccgccgcc
ctgctgcgcctgcacgaagcgccgcattacttccgccgcgcgggcaagggacgctacaag
aaggcgccggcggagatcatccagcaagcgctggccgccatcgagaagaagcgcctgctg
cagatccagatcggcgaatgggcgcagcaactcgcccaaggcaactgccccgcgcccatc
cgcgagcagctctacaagatcctcttcaagccggacaaaaacgcgcccgagtacaaggcc
gtggtggaagcagcgcgcgccacgcagaaggcgccgctggacctgctgcaggcggcaggc
gccatcgattcgccctaccaattccactggcgccgtttcctgttcgacaacttccccaag
ggctacggctttcccgcgaatctcgtggcgcccgagatcaaggatgaactgcccacggca
agcgtgcaggcttactccatcgacgactcgcagaccacggaaatcgacgacgcgctgtcg
gtgcagggcctgggctcgggcacggtgacggtgggcgtgcacatcgccgcgcccggcctg
gccgtgcagcgcggcgacgccatcgacaagctgggccgcgaccgcttgtccaccgtctac
atgccgggctacaagatcaccatgctgcccgacgacgtggtgcagcgctacaccctgcag
gaaggccaggcctgccccgccgtgtcgctctacgtgcgcttcaaggaggacacgttggag
ttggtggacagcgcaacgaaactggagcgcgtacccatcgcccacaacctgcgccacgac
caactggacggcgtggtgacggaggaatggctgagcaaccccggttttacccccgccctc
cccccagaagccacgtcgcatgcggccctgttgacccccgcgctgcgtgcagaactgagt
tttctgcatcgcctggcccgccacctgaaggcggggcgcgaaatcgtgcgcggcaaaccc
gagaccttcaaccggcccgactacaacttccgcctgctgggcggcgcgggtgagccgcaa
ggccaggagtcggtgcagatcggtgtgcgccaacgtggcgcggcgctggacttgatcgtg
gccgaggccatgatcctggccaacagcagttggggtcaatggatggccgaactgggcgtg
cccgccatctaccgcagccaggccagcctggcgcccggcgtcaaggtgcgcatgggcgtc
aaggccctgccgcacgcgggcatcggtgtgcccagctacgcctggagcacttcgccgctg
cgccgctacaccgacatggtgaaccagtggcagatcatcgcctgcgcgcgccatggcagg
acggccgcgctggccgcgcccttcaagcccaaggatgcggaactgttcgccatcatcagc
gccttcgacgcggcctacacgacatacaacggctaccaggccaccatcgaacgctactgg
acgctcaagtacctcgcgcagcaaggcatcactgagctggacgccacggtgttcaaggac
aacctggcccgcgccgacaccctgcccctggtgctgcccgtgctgggcacgcaaggcctg
tcgcgcggcgcgcgggtgcgggtgaaacttggcaccatcgacgaagtggccctggacgtc
agcggcacggtgatcgcgcgcctggacgccgacgccaacgccaacgggaccgagggtgat
ctcgccgaaaccgctgaaggcgaggacgatgactccctggccgccggcccgattgccatc
gcggtggatgtcaacgaggctcccgaggccgagggcgcgtccccgaccagcggcacctga
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