Hylemonella gracilis: DW355_08345
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Entry
DW355_08345 CDS
T09883
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hgr
Hylemonella gracilis
Pathway
hgr03410
Base excision repair
hgr03430
Mismatch repair
hgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DW355_08345 (recJ)
03430 Mismatch repair
DW355_08345 (recJ)
03440 Homologous recombination
DW355_08345 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hgr03400
]
DW355_08345 (recJ)
DNA repair and recombination proteins [BR:
hgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DW355_08345 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DW355_08345 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DW355_08345 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
QBK04777
UniProt:
A0A4P6UL34
LinkDB
All DBs
Position
complement(1772259..1774061)
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AA seq
600 aa
AA seq
DB search
MKIVTRDVPPRAAWVLEQAGVHPLLARLYAARGVRGTEELDDALARLLPPVTLKGAAEAA
TLLADAIAAGQRLCIVADYDCDGATACAVGIRGLRMLGAQHVHYLVPDRVVDGYGLTPPI
SQRVKDKGTDLLITVDNGIASVEGVALARELGMRVLVTDHHLPGTELPRADVIVNPNQPG
DAFESKSLAGVGVMFYVLLALRAELRARGAFEASSTVQGHPAPASTPSGGAAHGVTSAGA
KNAQPKLDSLLPLVALGTVADVVKLDANNRRLVAQGLQRIRKGHMPEGLRALFEVASRKP
AQASAFDFGFALGPRINAAGRLADMTLGIELLLTDDASRADELARMLDGINRERREIEGE
MRAQALEIVEQLHDPEEELPSALCVFDPDFHEGVVGIVAARLKDKLHRPSFVFAASRAPG
HEGELKGSGRSIPGFHLRDALDLVSKRHPDVLLRFGGHAMAAGCTIAEVHFEVFKQALNE
VAREWLDAATLTRRIETDGALPPEYRRTDVVDTLAREVWGQGFAPPTFSEEVEVLSQRLV
GEKHLALKLRHQGQAVDGIWFGRAEPLPPSQSRVKLAFRLEADEWQGVRRLRFLVEGAEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacccgcgatgtcccgccgcgcgccgcctgggtactcgaacaggccggt
gtgcacccgttgctggcccgtctgtatgccgcccgtggcgtgcgcggaaccgaggaactg
gacgacgcgctcgcgcgcttgctgccgcccgtcacgctcaagggcgcggccgaagccgcc
acactgctggccgatgcgatcgccgccggtcaacgcttgtgcatcgtggccgactacgac
tgcgatggcgccaccgcctgcgccgtaggcatccgcggcctgcgcatgctgggcgcgcag
cacgtgcactacctcgtgcccgaccgggtggtggacggctatggcctcacgccgcccatc
agtcagcgggtgaaggacaagggcaccgacctgctcatcaccgtggacaacggcatcgcc
agcgtcgagggtgtggcgctggcgcgcgaactcggcatgcgggtgttggtgaccgaccac
cacctgcccggaaccgaactgccacgggcggacgtcatcgtgaaccccaatcagcccggc
gatgccttcgagagcaagtcattggcgggcgtgggcgtgatgttctacgtcctgctggcg
ctgcgcgcggagctgcgcgcgcgcggcgcgtttgaggcatcgagcaccgtgcagggccac
cccgcgccagcgagcaccccttcgggcggcgcagcacacggcgtgacaagcgccggagcc
aagaatgcccagccgaaactcgactcattgctgcccttggtcgcgctcggcaccgtggcc
gacgtggtgaagctggacgcgaacaaccggcgcctggtcgcgcaaggcctgcagcgtatc
cgcaaaggccatatgcccgaagggctgcgtgctctgttcgaggtggcgtctcgcaaaccg
gcccaggccagcgcctttgatttcggcttcgccctcgggccacgcatcaacgccgcaggg
cgactggccgacatgacattgggcatcgaactgctgctgaccgacgacgccagccgcgcc
gacgaactggcgcggatgctcgacggcatcaaccgcgagcggcgcgagatcgaaggagaa
atgcgagcgcaggcgctggagatcgtcgaacagctccacgatccagaggaagaattgccg
agcgcactctgcgtcttcgacccggatttccacgaaggcgtggtcggcatcgtcgccgcg
cggctcaaggacaagctgcaccgccccagcttcgtcttcgccgccagccgggcaccggga
cacgaaggcgagctcaaagggtcgggccgctccatccccgggtttcacctgcgcgacgcg
ctggacctggtctccaagcgccatccggacgtgctgctgcgctttggtggtcacgcgatg
gcggcgggctgcaccatcgccgaggtccatttcgaggtgttcaagcaggcactgaacgag
gtggcgcgggaatggctggatgccgccaccctcacacgccgcatcgagacggatggcgcc
ctgcctccggagtaccgccgcacggacgtggtggacacgctcgcccgagaagtctggggc
cagggcttcgccccacccaccttcagcgaggaagtggaagtgctgtcccagcgcctggtg
ggcgagaagcacctggcgctcaagctgcggcaccaaggccaggcggtggacggcatctgg
tttggccgcgcggaaccgctcccccccagccaaagccgggtcaagctggcgtttcgcctg
gaagccgatgaatggcaaggcgtgcgccggctgcgcttcctggtcgagggcgccgagctc
taa
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