Hylemonella gracilis: DW355_11335
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Entry
DW355_11335 CDS
T09883
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hgr
Hylemonella gracilis
Pathway
hgr03030
DNA replication
hgr03430
Mismatch repair
hgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DW355_11335
03430 Mismatch repair
DW355_11335
03440 Homologous recombination
DW355_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hgr03032
]
DW355_11335
03400 DNA repair and recombination proteins [BR:
hgr03400
]
DW355_11335
Enzymes [BR:
hgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DW355_11335
DNA replication proteins [BR:
hgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DW355_11335
DNA repair and recombination proteins [BR:
hgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DW355_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
KH_PARP14_4
Motif
Other DBs
NCBI-ProteinID:
QBK05265
UniProt:
A0A4P6UMD1
LinkDB
All DBs
Position
complement(2391245..2394754)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSTPSFSHLRLHTEFSVVDGATRVDDVVDAAAKDGQPALAITDLNNLFGAIKFYKAARGK
GVKPLIGVEILLEGLGADAQVTSRLLLLVQNKQGYLNLSELLARAWTSNVHKAQAIVKLA
WLKELHEGLIVLSGAQAGAVGQALVQGDTARAHDVALQFATLFPHRFYLELQRAGRSDDE
AHVGAAVQLASRLKLPVVATHPVQFLTEDDYEAHEARVCIAEGEILGNPRRVRRFTREQY
FKSAAQMQALFADIPSALANTLEIAKRCNLTLTLGKPQLPNFPIPGGLSIEDYFRKASLE
GLEDRLALLYPDATKRDAERPRYLERLEFEINTILKMGFPGYFLIVGDFIQWAKANGCPV
GPGRGSGAGSLVAYALKITDLDPLAYKLLFERFLNPERVSMPDFDIDFCQANRDRVIEYV
KERYGREAVSQIATFGTMAARAAIRDVGRVMDMSYTFCDGISKLIPNKPGQHITIDGALK
EVPELAERQAKEDEVKNLLELAQKLEGMTRNVGMHAGGVLIAPGKLTDFCPLYQQPGSDA
AVSQYDKDDVEAVGLVKFDFLGLATLTILEIAREFIMKRHPGQEHFNFESIPLDDKATYQ
LFQDGKTEAVFQFESRGMQGMLRDAKPTRLEDLIALNALYRPGPMDLIPSFVARKHGREE
IEYPHPLVADMLSETYGIMVYQEQVMQTAQILGGYSLGGADLLRRAMGKKKAEEMAQHRE
IFRKGAAGNGIAQDKADEIFDLMEKFAGYGFNKSHAAAYSLLAYHTAWLKVHYTAEFFCA
NMTVEMDDTDKLKVLFEDAQKMGMRFEPPDVNRGHYRFEPVSDSVIRYGLGAVKGTGQQA
IEAIVKAREEDGPFKSLYDFCNRVDRARINKRTVEALIKAGAFDSLNLNRAALLASIDRA
FDFATATAANANQGGLFDLTADDGADAHGSSTQEPELVEALPWGVKERLSHEKTAVGFYF
SGHLFDEVAHEVRRFAKRELAELIDTREPQLLAGIVSDLRVINGQRGRLALFKLDDKSVA
LDARVDEALLNANKNLLKDDELVVVMAKVMPDRFSGGLQLNVTQLWSLEAARCRFGKYLS
VAVNLSSGRYPDVRRLLTDHPPQREMTEQGELLRGLPVRFTLKVGSEAIGTYQSALKMED
EKTRFYPSDAALAGWMAEADQGKAVVVYE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccagcttctcccacctccgcctccacaccgagttctccgtcgtcgatggt
gccacccgcgtggacgatgtggtggatgccgccgcgaaagacgggcaacccgcgctggcc
atcaccgacctcaacaacctgttcggggccatcaagttctacaaggctgcgcgcggcaaa
ggtgtcaaaccgctgatcggcgtggagatcctgctcgaaggcctgggggccgatgcgcag
gtgacgagtcgactgctgttgctggtgcagaacaagcagggctacctcaacctcagcgag
ctgctggcacgcgcctggaccagcaacgtccacaaggcgcaggccatcgtcaagctggcc
tggctgaaggaactgcacgaaggcttgatcgtgctgtccggcgcgcaagccggggccgtg
ggtcaggccctggtgcaaggcgacacggcccgcgcccatgatgtggccttgcagttcgcc
accctctttccgcaccgcttctacctggagctgcagcgcgcggggcgctcggacgacgaa
gcgcatgtgggcgccgccgtgcagttggcttcccggctgaagttacccgtggtcgccaca
catccggtgcagtttctcaccgaggacgactatgaggcgcatgaagcccgtgtctgcatt
gccgagggcgaaatcctcggcaacccgcggcgtgtgcgccgcttcacgcgggagcagtat
ttcaagagcgccgcgcagatgcaggcgctgttcgccgacattccttcggcactcgccaac
acgttggaaatcgccaagcgctgcaacctcacgctgaccctgggcaagccgcagttgccc
aacttcccgatcccgggcggcctgtccatcgaagactatttccgcaaggcttcgctcgaa
ggcctggaggatcgcttggccctgctctatccggacgcgaccaagcgcgacgccgagcgt
ccgcgctatctggaacggctggaattcgagatcaacacgatcctgaagatgggcttcccc
ggctacttcctgatcgtgggcgacttcatccagtgggccaaggcgaatggctgccccgtg
ggaccgggccgcggctcgggcgcgggctcgctggtggcctacgcgctcaagatcaccgac
ctggatccgctcgcctacaagctgctgttcgagcgcttcctgaatcccgagcgcgtctcg
atgcccgacttcgacatcgacttctgccaggccaaccgcgaccgcgtgatcgagtacgtg
aaggagcgctacggccgcgaggccgtgagccagatcgccaccttcggcaccatggccgcg
cgcgccgccatccgcgacgtggggcgcgtgatggacatgagctacaccttctgcgacggc
atcagcaagctgatccccaacaagccaggccagcacatcaccatcgacggcgcgctcaag
gaagtccccgagctcgccgagcgccaggccaaggaagacgaggtcaaaaacctgctggaa
ctggcgcagaagctcgagggcatgacccgcaacgtcggcatgcacgcgggcggtgtgctg
atcgcgcccggcaagctcaccgacttctgcccgctctaccagcagcccggcagcgacgcg
gccgtgagccagtacgacaaggacgacgtggaggccgtgggcctggtgaagttcgacttt
ctgggcctggccacgctgaccatcctggagatcgcgcgcgaattcatcatgaagcggcac
ccgggccaggagcacttcaatttcgagagcatcccgctggacgacaaggccacctaccag
ctgttccaggacggcaagacagaagccgtgttccagtttgaaagccgcggcatgcagggc
atgttgcgcgacgccaaacccacgcggctggaagacctgatcgccctcaacgcgctgtac
cgccccggcccgatggacctgattccgagcttcgtggcgcgcaagcatggacgcgaggaa
atcgagtacccgcacccgctggtggccgacatgctgtccgagacctacggcatcatggtc
taccaggaacaggtgatgcagaccgcgcagatcctgggtggttactcgctcggcggcgcc
gacctgctgcgccgcgccatgggcaagaaaaaggccgaggagatggcgcagcaccgcgag
atcttccgcaagggcgcagccggcaacggcattgcccaggacaaggccgacgaaatcttc
gatctgatggagaaattcgcgggctacggcttcaacaagtcgcacgcagccgcctactcg
ctgctggcctaccacacggcctggctcaaggtgcattacacggccgagttcttctgcgcc
aacatgaccgtggaaatggacgacaccgacaagctcaaggtgctgttcgaggatgcgcag
aagatgggcatgcgcttcgagccgccggacgtgaaccgcggccattaccgcttcgagccg
gtctccgactcggtgatccgctacggcctgggcgccgtcaagggcacggggcagcaggcg
atcgaggccatcgtcaaggcacgcgaggaggacggccccttcaagagcctgtacgacttc
tgcaaccgcgtggaccgcgcccgcatcaacaaacgcacggtcgaagccctgatcaaggcc
ggcgccttcgacagcctgaacctcaaccgcgccgcgctgctggcctccatcgatcgcgcc
ttcgatttcgcgacggccaccgccgccaacgccaaccaaggcggcctgttcgacctgacg
gccgacgatggcgccgacgcgcatggttccagcacgcaagagcccgaactggtggaggct
ctgccctggggcgtcaaggaacgcctgagccacgagaagaccgccgtgggcttctacttc
tcgggccatctgttcgacgaagtcgcgcacgaggtgcggcgtttcgccaagcgcgaactc
gccgaactgatcgatacgcgcgagcctcagttgctggccggcatcgtcagcgacctgcgc
gtgatcaatgggcagcgcggccggctggccctgttcaagctggacgacaagagcgtggcg
ctggacgcccgcgtggatgaagccctgctgaacgccaacaagaacctgctcaaggacgac
gagctcgtcgtcgtcatggccaaggtcatgcccgaccgtttctcgggtggtctgcagctc
aatgtcacccagctctggagcctggaagcggcgcgctgccgcttcggcaagtacctcagc
gtggccgtgaacctgagttctggccgttaccccgatgtacgccgcctgctgaccgatcac
ccgccccaacgggaaatgacggagcaaggggaattgctgcgaggcctgcccgtgcgcttc
accctcaaggtgggcagtgaggcaatcggcacctaccagtccgccttgaagatggaagac
gaaaagacccggttctaccccagtgacgcggcgctcgcgggctggatggccgaggccgac
cagggcaaggcggtggtggtctacgagtag
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