Hylemonella gracilis: DW355_15905
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Entry
DW355_15905 CDS
T09883
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hgr
Hylemonella gracilis
Pathway
hgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DW355_15905 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgr03019
]
DW355_15905 (pnp)
03016 Transfer RNA biogenesis [BR:
hgr03016
]
DW355_15905 (pnp)
Enzymes [BR:
hgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DW355_15905 (pnp)
Messenger RNA biogenesis [BR:
hgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DW355_15905 (pnp)
Transfer RNA biogenesis [BR:
hgr03016
]
Prokaryotic type
tRNA degradation factors
DW355_15905 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
DNA_pol3_a_NI
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QBK06011
UniProt:
A0A4P6UQI8
LinkDB
All DBs
Position
complement(3431506..3433668)
Genome browser
AA seq
720 aa
AA seq
DB search
MSMFNKITKTFQWGQHTVTMETGEIARQAGGAVLVNVDDTVVLATVVASKSAKPGQDFFP
LTVDYLEKTYAAGKIPGSFFKREGRPSEYETLTSRLIDRPIRPLFPEGFFNEVQVVVHTV
SLNPEVDADIPALIATSAALSISGIPFNGPIGAARVGYVNGEYVLNPGQTQRKDSQMDLV
VAGTEAAVLMVESEALQLSEEIMLGAVVFGHDQGKIAINAIHELVRDAGKPTWDWTAPAK
DEALIAKIDSLAKAKLEAAYQIRNKQARTQACRTAYADVFAGLKADGVEFDGVAVEGLLF
EIEAKIVRGQILAGEPRIDGRDTRTVRPIEIRDSVLPRTHGSALFTRGETQALVVTTLGT
ERDAQRIDALAGEYEDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALVAVLPTK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMNAGVPLKAHVAGIAMGLIKEDNKFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITREIMQVALAQAKEARMHILGKMQ
AAVGEAKAEVSQFAPRLYTMKINPEKIRDVIGKGGATIRALTEETGTQIDIAEDGTITIA
STEAAKAEEAKRRIEQITAEVEIGKVYEGPITKILDFGALVNLLPGKDGLLHISQIAHER
VEKVTDYLSEGQIVKVKVLETDEKGRVKLSMKALLERSEQPQRAERAEAPANGGDNGEQA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcaacaaaatcaccaagaccttccaatggggtcagcacaccgtcaccatg
gaaacgggcgaaatcgcccgccaagccggcggtgccgtcctcgtcaatgtcgatgacacc
gtggtgctggccaccgtggtggcgtccaagtctgccaagcctggccaggatttctttccc
ctgacggttgactaccttgagaagacctacgccgctggcaagattcccggcagcttcttc
aagcgcgaaggtcgccccagcgaatatgagacgctgaccagccgcctgatcgatcgcccg
atccgtccgctgttcccggaaggtttcttcaacgaagtgcaggtggtggtccacaccgtt
tcgctgaatccggaagtcgatgccgacattcccgccttgatcgccaccagcgcggccctg
tccatcagtggtattcccttcaacggccccatcggcgcggcgcgcgtgggctacgtcaat
ggtgaatacgtcctcaacccgggccagacccagcgcaaggacagccagatggacctggtg
gtcgctggcaccgaagccgccgtgctgatggtggaatcggaagcgctgcaactgtcggaa
gagatcatgctgggcgccgtggtcttcggccacgaccagggcaagattgccatcaacgcc
attcatgaattggtgcgtgacgccggcaagccgacctgggactggaccgccccggccaaa
gacgaggcgctgatcgccaagatcgacagcctggccaaagccaagctcgaagctgcctac
cagattcgcaacaagcaggcccgcacccaggcctgccgcaccgcttacgccgacgtgttc
gccggcctcaaggccgatggcgtcgagttcgacggcgtggccgttgaggggctgctgttc
gagattgaagccaagatcgtgcgtggccagatcctggcgggtgaaccgcgcatcgacggt
cgtgacacccgtaccgtgcgcccgatcgaaatccgcgacagcgtgctgccgcgcacccat
ggctcggcactgttcacgcgtggcgaaacccaggccctggtcgtcacgaccttgggaacc
gaacgcgacgcgcagcgcatcgacgcattggccggtgagtatgaggaccgcttcatgctg
cactacaacatgccgcccttcgccaccggcgagacggggcgcgtgggcacgcccaagcgc
cgcgaaattggccatggccgcctggccaagcgcgccctggtcgccgtgctgccgaccaag
gaagaattcccctacaccatgcgcgtggtgtcggaaatcaccgagtccaacggttcgtcg
tccatggcgtccgtctgcggcggttgcctctcgctgatgaacgcgggcgtgccgctcaag
gcgcacgtggccggcatcgccatgggcctgatcaaggaagacaacaagtttgccgtgctg
accgacatcctgggcgacgaggaccacctcggtgacatggacttcaaggtggccggtacc
accaacggcatcacggccctgcagatggacatcaagatccagggcatcacgcgcgagatc
atgcaggttgccctggcccaggccaaggaagcgcgcatgcacatcctgggcaagatgcag
gccgccgtgggcgaggccaaggccgaggtgagccagttcgcgccgcgcctctacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgcgaccatccgcgcg
ctgaccgaagagaccggcacccagatcgacatcgcggaagacggcaccatcaccatcgcc
tcgaccgaggccgcgaaggccgaggaggccaagcgccgcatcgagcagatcaccgccgaa
gtcgagatcggcaaggtctacgaaggcccgatcaccaagatcctggacttcggcgccctg
gtcaacctgctgcccggcaaggatggcctgctgcacatcagccagatcgcgcacgagcgc
gtcgagaaggtcacggactacctgtccgaaggccagatcgtgaaggtcaaggtcctggaa
accgacgagaagggccgcgtcaagctgtccatgaaggccttgctggaacgttcggagcag
ccgcaacgtgccgagcgtgctgaagcccccgcgaatggcggcgacaacggcgaacaggct
tga
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