Hylemonella gracilis: DW355_16890
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Entry
DW355_16890 CDS
T09883
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hgr
Hylemonella gracilis
Pathway
hgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DW355_16890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgr03019
]
DW355_16890
Enzymes [BR:
hgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DW355_16890
Messenger RNA biogenesis [BR:
hgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DW355_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QBK06166
UniProt:
A0A4P6UN39
LinkDB
All DBs
Position
3654199..3655914
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AA seq
571 aa
AA seq
DB search
MNFEELKLAPAILKAVREQGYETPTAIQEQAIPLVMQGNDLLGGAQTGTGKTAAFTLPLL
HRLAMSRSVQNKWGGNGIRALVLTPTRELAAQVEESVRNYGKYLQLESTVIFGGVGMNPQ
IARVKKGVDILVATPGRLLDLQQQGFMDLSQVQMLVLDEADRMLDMGFIHDVKKVLALLP
KEKQSLLFSATFSDEIRALAEGLLKNPQSVQVTPRNTTVQRITQNVHTVGRSKKKALLAH
IVNTNEWSQVLVFTRTKFGANHVAEYLNKNGVTAMALHGNKSQGARTQALAGFKSGEIRA
LVATDIAARGIDIDELPHVVNYEIPNIPEDYVHRIGRTGRAGREGQAVNLVCLDEQGFMA
EIERFTKQQIAVVETPAEFAPDEGERAEPIAMGRQTLWGGLGKPPSRDVMAAAAKAARQE
MVQRIRENKAGGQGERGAGGGNGGGRSNGPGRQNQNRSDRQDRPEGQRQGRPQGGGGQGG
NRNNEQRRANSSGGGRGQGGGQGGGNGGGYGGGGGGGGQPDPLRTRTDALSQGNRRRGGG
GGGGNRGGQGGKGQGGGGVDPLRTNFGRISH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaagaactgaaactggccccggccatcctgaaggctgtccgtgagcagggc
tatgaaacgcccaccgcgatccaggaacaagcgatcccgctggtcatgcaaggcaacgac
ctgctgggcggcgcccagaccggtaccggcaaaaccgccgccttcaccctgcccctgctg
caccgcctcgcgatgagccgcagcgtgcagaacaaatggggcggcaacggcatccgcgcc
ctggtgctcacgcccacgcgtgagcttgccgcgcaggtcgaggagtccgtgcgcaactac
ggcaagtacttgcagctcgaatccaccgtgatctttggcggcgtgggcatgaacccgcag
atcgcccgcgtcaagaaaggcgtggacatcctggtcgccacgccgggccgcctgctggac
ctgcagcagcaaggcttcatggacctgtcccaggtgcagatgctggtgctcgacgaagcc
gaccgcatgctggacatgggcttcatccacgacgtgaagaaggtgctggccctgctgccc
aaggaaaaacagagtctgctgttttccgccaccttcagcgacgaaatccgcgccctggcc
gaaggcctgctcaagaacccgcagagcgtgcaggtcacgccgcgcaacaccacggtgcag
cgcatcacgcaaaacgtgcacaccgtgggtcgcagcaagaagaaggccctgctcgcgcac
atcgtcaacacgaatgaatggagccaggtgctggtgttcacgcgcaccaagttcggtgcc
aaccacgtggccgagtacctgaacaagaacggcgtcaccgccatggccctgcacggcaac
aagagccagggtgcacgcacccaggccttggccggcttcaagagcggggagatccgtgcc
ctggtcgccaccgacatcgccgcgcgcggcattgacatcgacgagttgccgcacgtcgtg
aactacgagattcccaacatccccgaagactacgtgcaccgcatcggccgcacgggtcgc
gccggccgcgaaggccaggccgtcaacctcgtctgcctggacgaacagggtttcatggcc
gaaatcgagcgcttcaccaagcaacagattgccgtggtggaaacgcccgccgaatttgcg
cccgacgaaggcgagcgcgcagaacccatcgccatgggtcgccagaccctgtggggcggc
ctgggcaagccgcccagccgcgacgtgatggcggcggccgccaaggccgcgcgccaggag
atggtgcaacgcatccgcgaaaacaaggccggcggtcagggcgaacgcggtgcgggtggc
ggcaacggcggcggccggagcaacggccccggacgtcagaatcagaaccgctcggaccgt
caggaccgtcccgaaggccaacgccagggcagaccgcaaggcggtggtggccaaggcggc
aaccgcaacaacgaacagcgccgcgccaacagcagcggcggcggtcgtggtcaaggtggt
ggccaaggtggtggcaacggcggcggttacggtggtggtggtggtggcggcggtcaacct
gatccgctgcgcacccgcaccgacgcgctgagccagggcaatcgccgccgtggtggcggc
ggcggcggtggcaaccgcggcggccaaggtggcaagggccagggcggcggcggtgtcgat
ccgctgcgcacgaacttcggtcgcatctcgcactga
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