Helicobacter gastrocanis: NHP190003_00080
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Entry
NHP190003_00080 CDS
T10845
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hgs Helicobacter gastrocanis
Pathway
hgs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hgs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NHP190003_00080 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hgs01007
]
NHP190003_00080 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgs03016
]
NHP190003_00080 (lysS)
Enzymes [BR:
hgs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NHP190003_00080 (lysS)
Amino acid related enzymes [BR:
hgs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NHP190003_00080 (lysS)
Transfer RNA biogenesis [BR:
hgs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NHP190003_00080 (lysS)
Prokaryotic type
Other AARSs
NHP190003_00080 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCZ16726
UniProt:
A0ABM7SAG8
LinkDB
All DBs
Position
7025..8521
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AA seq
498 aa
AA seq
DB search
MFDTPYIQQRLQKADGLRQAHKNPYDNQVQRTLDNAHFLEKFSDLHTKDEPKDPTSTNAL
VGRVRFIRLMGKACFLKIEDQSAQVQVYLSQNDLGKEGFEDFKKCVEVGDIVNVIGYPFV
TKTGELSLHATAYKILTKAIVPLPEKFHGLSDIELRYRQRYVDLIANPEVKEVFKTRSKI
VATIRRFFEDKGFLEVETPMMHPIAGGANARPFITYHNALEVERYLRIAPELYLKRLVVG
GFEAVFEINRNFRNEGMDHSHNPEFTMLEFYWAYKTYEDLITLTKELFSTLLHALNLPST
IAYQEHQIDFNAVRVLGFKEALVQVGGLDKDTINDPKKLQNHLEKEGVRLEGLLTYGKLL
AEAFDLCVEHKLINPTFITEYPIEISPLARRNDSNPEIADRFELFIAGKEIANGFSELND
PIDQYGRFEEQVKAKESGDEEAQFMDTDYVWALGHGMPPTAGEGIGIDRLVMLLTNSKTI
KDVILFPAMKPENKDNHA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaccccctatatccaacaacgcttgcagaaagcagacggcttacgccaagcg
cataaaaacccttatgacaaccaagtccagcgcaccctagacaacgcccattttttagag
aagtttagcgatttacacacaaaagatgagcctaaagaccctacaagcacaaacgcccta
gtggggcgggtgcgctttatccgcctcatgggcaaggcgtgtttcctcaaaattgaggat
caaagcgcacaagtgcaggtgtatttgtcccaaaacgacctaggtaaagagggctttgag
gactttaaaaaatgcgtggaggtgggcgacattgtcaatgtgatcggctacccctttgtg
accaaaaccggcgaactcagcctacacgccaccgcctataagattttaaccaaagccatc
gtgcccctgcccgagaagtttcacggcttaagcgatatagagctgcgctaccgtcaacgc
tatgtggatttaatcgccaaccccgaagtcaaagaggtgtttaaaacccgcagtaaaatt
gtcgccaccatccgccgtttctttgaagacaagggctttttagaggtggaaaccccgatg
atgcaccccatcgccgggggggcaaatgcccgccctttcatcacctaccacaacgcccta
gaagtagagcgttacttgcgtatcgcccccgaattgtatttaaaacgccttgtggtgggt
gggtttgaggcggtgtttgagatcaaccgcaattttagaaacgaggggatggaccactcc
cacaaccccgagttcacaatgttagaattttattgggcgtataagacttatgaggatttg
atcacactcaccaaagagctctttagcacgctgctgcacgccttaaacttgcccagcacg
atcgcctaccaagaacaccaaattgattttaacgccgtgcgggtgctgggctttaaagag
gctttagtgcaagtgggtgggctagacaaagacaccatcaacgaccccaagaaactccaa
aaccacctagaaaaagagggtgtgcgtttagagggcttactcacttatggcaaacttttg
gccgaagcttttgatttgtgcgtggagcataaactcatcaatccaaccttcatcacagaa
taccccattgaaatcagtccgctggcgcggcgtaacgactctaaccccgagatcgccgac
cgattcgagcttttcattgcaggcaaagagatcgccaatggctttagtgagctcaacgac
cccattgaccaatacgggcgttttgaggaacaagtgaaagccaaagagagtggggatgaa
gaggcgcaattcatggacaccgattatgtgtgggctttagggcatggcatgccccctaca
gccggcgaggggatcggcatcgatcgcttggtgatgctccttacaaattctaaaacgatc
aaagatgtgattttattcccggcgatgaagcccgagaacaaggacaaccatgcctaa
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