Helicobacter gastrocanis: NHP190003_03230
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Entry
NHP190003_03230 CDS
T10845
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hgs Helicobacter gastrocanis
Pathway
hgs00540
Lipopolysaccharide biosynthesis
hgs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hgs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NHP190003_03230
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hgs01005
]
NHP190003_03230
Enzymes [BR:
hgs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NHP190003_03230
Lipopolysaccharide biosynthesis proteins [BR:
hgs01005
]
Core region
NHP190003_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF6594
Motif
Other DBs
NCBI-ProteinID:
BCZ17041
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All DBs
Position
complement(280179..281426)
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AA seq
415 aa
AA seq
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MDRHKVATLFFTLFFIFSFKKPIPQILMVALALGALLYYKACKPPLRLGPFKWLIASMLT
MFLVVLPNLFVGGDLEAWHYNLRSLNMPLVYVLGVVALICLSSIQIRLHTKILFYSMAFA
CFFNGGFALVQKVFLGMGRVVGLSTVVGFVTLTSMALFGCFIYAIYTHNSKERWLFSAAM
VVGFLVVLFSATRSASIAFAITFIALCVFLRRTKQWRYMGLMALCFGGLFFLNQVLEQHA
LLHTARTQDENFSHDLQLYTQKNPKSSIGLRLARWQEALAIAKLSPLIGMSLSTKCRRLD
QILALSHSYRKADQIDCAEKYDNEFFNTLAHRGILGLVALAWFICVLWCFFAKRKDTIGV
FMLSMLVFYVSLGIGFDPFDFFIEGSFFVGMVVMAAMAERLPAELLKSEWATTHN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttggatcgccacaaggtggcgaccctttttttcactctcttctttatcttttcgtttaaa
aaacccatcccccaaattctcatggtggcgttggcactaggggctttgctctactacaaa
gcctgcaaacccccgctgcggctaggaccctttaaatggctcatcgcctccatgctcacg
atgtttctagtggtgttgccaaatttatttgtgggcggggatttagaagcatggcattac
aatttacgctctttaaacatgcccttagtctatgtgctgggcgtggttgcgctcatttgt
cttagcagcatacaaatacgcctccacacaaaaatcttgttttacagcatggcttttgcc
tgttttttcaatggagggtttgccctcgtgcaaaaggtctttttgggcatggggcgggtg
gtgggccttagcacggttgtgggctttgttacgctcacttctatggcgctctttggctgt
tttatctacgccatctatacccacaactctaaagaaaggtggctttttagcgcagcgatg
gtggtgggttttttagtggtgctttttagcgccaccagaagcgcctccatcgcttttgcc
atcacttttatagctctatgtgtgttcttaaggcgcaccaaacaatggcgctatatgggg
ctgatggcgctgtgctttgggggcctgtttttcttaaaccaagtcctagagcagcatgcc
ctcttgcacactgcaaggacgcaagatgaaaattttagccacgacctacagctttacacg
caaaaaaaccccaaatccagcatcggcctgcgccttgctcgctggcaagaagccctagcc
atcgccaagctttcacccctcattggcatgagccttagcacgaaatgcaggcgactagat
caaattttagccctgtcgcactcctaccgcaaagccgaccaaatcgattgtgccgagaaa
tacgacaatgaatttttcaacactttagcgcatcgggggattttggggctagtggctttg
gcgtggtttatatgcgtgctgtggtgcttttttgccaaacgaaaggacaccatcggagtg
ttcatgctctctatgctggtcttttatgtgagtcttggaattggttttgatccctttgat
tttttcattgaggggagcttttttgtggggatggtggtgatggcagcaatggcagagcga
ctgcccgcagagttgctaaagagcgaatgggcaacaacccacaactag
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