Helicobacter gastrocanis: NHP190003_06380
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Entry
NHP190003_06380 CDS
T10845
Name
(GenBank) Putative outer membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hgs Helicobacter gastrocanis
Pathway
hgs00540
Lipopolysaccharide biosynthesis
hgs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hgs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NHP190003_06380
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hgs01005
]
NHP190003_06380
Lipopolysaccharide biosynthesis proteins [BR:
hgs01005
]
Lipid A
NHP190003_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
BCZ17356
LinkDB
All DBs
Position
594114..595076
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AA seq
320 aa
AA seq
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MLDVPTPLVPYKKQYINLLSENDAYVYPADRYYSAGNRISYTSKEYNFWGAAYAHSWMAW
SRYLTLMIHSPKMTRFNVSMTQTMYTPHLNSHTSEAIVVGDHLYAGWLRASLALFQRAPH
ALERILISLGTVGPNSMAGQTQNWLHGLWGDKTFQGWHNQLRDEFIFQFNYQWLYQVYIL
KTRFFSMDILPAVDIALGNAITHVRLGSLLRFGYNLDTDFGPNKIGSLFSGGQPFSNRFS
FYFFIGASGSYQPIDIFIQGNSPQTRGITHLPDALYAVEGGFALLYRGFRLSFIATNLSK
GFEEQPLSHNIGTVELDIAF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtccccacacctttagttccctataaaaaacaatacattaacctgctctct
gaaaacgatgcctatgtttatccggccgatcgctactacagcgcaggaaatcgtatcagc
tacacgagtaaagaatataatttttggggtgcggcttatgcacactcttggatggcctgg
agtcgttatttaaccttgatgatccactcccctaaaatgactcgttttaatgtgagcatg
actcagaccatgtacacgccacacttaaatagccatactagcgaagcgatcgttgtgggc
gatcacctctatgcgggttggttaagagctagtcttgccctcttccaacgcgccccgcat
gccctcgagagaatcttgatttctctaggcacagtggggcccaattcgatggccggacaa
acccaaaattggttgcatgggctatggggtgataaaacctttcaaggttggcataaccaa
ttgcgcgatgaattcatcttccaattcaattaccagtggctgtatcaagtctatatcctc
aaaacgcgtttttttagcatggatattctgcccgctgtggacattgccctgggcaatgcc
atcacccatgtacgcctcggttcgcttcttagatttgggtataacctagacacagatttt
ggaccgaataaaattggatctctttttagcggagggcaaccttttagcaaccgcttttct
ttttactttttcataggggctagcgggagttaccaacctatcgatatttttatccagggc
aatagccctcaaactagagggatcacccatctacccgatgcactctatgctgtagagggt
gggtttgctctgctttatcgaggatttcgtctgtccttcattgccaccaacttgagcaag
ggatttgaggagcaacccttaagccacaatatcggtactgttgaacttgatatcgccttt
taa
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