Helicobacter gastrocanis: NHP190003_08370
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Entry
NHP190003_08370 CDS
T10845
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hgs Helicobacter gastrocanis
Pathway
hgs03030
DNA replication
hgs03430
Mismatch repair
hgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHP190003_08370
03430 Mismatch repair
NHP190003_08370
03440 Homologous recombination
NHP190003_08370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hgs03032
]
NHP190003_08370
03400 DNA repair and recombination proteins [BR:
hgs03400
]
NHP190003_08370
Enzymes [BR:
hgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHP190003_08370
DNA replication proteins [BR:
hgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHP190003_08370
DNA repair and recombination proteins [BR:
hgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHP190003_08370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_assoc_2
AAA_30
AAA_14
TIP49
Mg_chelatase
AAA_19
DEAD
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCZ17555
LinkDB
All DBs
Position
779809..781236
Genome browser
AA seq
475 aa
AA seq
DB search
MSLALKYRPKHFSELVGQESVAKTLGLALEKGLLAHAYLFSGLRGSGKTSSARIFARALQ
CAKGISATPCDACSSCVESLQGTHLDTIEMDGASHRRIEDVRGIIEQSRYKPSLGRFKIF
IIDEVHMLTKEAFNALLKTLEEPPAHVKFILATTDPFKLPATILSRTQQFHFKKIPLKAV
VAHLKFIFEKEDVDFEEPALEMLARSGGGSLRDTLTLAEQAISYGDQSVSALATSQMLGL
VDSKILEEFFNALIAGTSVESLLRTLAEHDTAMVLEEMARFLKEAMFSQKWSLGVLEPFM
SAVAQAQPLLNYGADGDFVLALNTLKMQASLQQTPQTATPKPAPTTQAQLPAQAPTPPTA
PQAGPKELFQQFIAKIESTNAELGRVFREFLVFQSFGNGVLFLHSSADEGANLLLRQHYK
TLIVPCLKEVFGPSARIETDKSKPRPLEQFKENNPSLMQAMQDKLGTTDGKVEDF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcttgcactgaaataccgccccaaacattttagcgagctggtggggcaggagagt
gtcgccaaaactttgggccttgccctggaaaaggggctgttagcgcacgcctatttgttt
agcggacttagggggagcggcaagacgagcagtgcacgcatttttgctagggctttgcaa
tgtgcaaagggcattagtgccacgccttgcgatgcttgctcctcttgtgtagagagtttg
caaggcacgcatttagacaccatagagatggacggcgcgtcccatcggcggattgaagat
gtgcgcggcatcattgagcaaagcaggtacaaaccctctttggggcgttttaaaatcttc
atcatcgatgaggtgcatatgctcactaaggaagccttcaacgccttgttgaagacctta
gaggagcccccagcccatgtcaaattcattttagccaccaccgacccctttaaactcccc
gccacgatcttgagccgcacgcaacaattccactttaagaaaatcccccttaaggcggtt
gtggcgcatttgaaatttatttttgagaaagaagatgtggactttgaagagccggcctta
gaaatgcttgctaggagtgggggggggagtttgcgcgacaccttgactttagccgagcaa
gccatcagctatggcgatcagagcgtgagtgcgcttgccacaagccaaatgttagggctt
gtggatagtaaaattttagaagagtttttcaacgctttaatcgccgggacgagtgtagag
agccttttacggactttagccgaacatgacacggcgatggtgcttgaagaaatggcacgc
tttttaaaagaagccatgtttagccaaaagtggtctttgggagtgctagagcctttcatg
agcgcagtggcgcaggcgcaacctctgctaaattatggggcggatggggattttgtgctc
gccttaaatacgcttaaaatgcaggccagcctacaacagaccccccaaaccgccacacca
aaacctgcccccaccacgcaagcacagctccccgctcaagcccccacgccccccacagcc
ccacaagccggaccaaaagagttgttccaacaattcattgccaaaattgagagcacaaat
gccgagttaggtagggtgtttagggagtttttagtgtttcagtccttcggcaatggagtt
ttgttcctacactctagtgctgatgagggcgcaaatttgctcttgcgccagcattacaag
accttgattgtgccctgcttaaaagaagtctttggcccaagtgcgcgcattgaaaccgat
aaatccaagccaagacccctagagcagtttaaagagaacaacccctctttaatgcaagcc
atgcaagacaaactcggcacgaccgatggcaaggtagaggacttctaa
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