Helicobacter gastrocanis: NHP190003_11620
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Entry
NHP190003_11620 CDS
T10845
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hgs Helicobacter gastrocanis
Pathway
hgs03420
Nucleotide excision repair
hgs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHP190003_11620
03430 Mismatch repair
NHP190003_11620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hgs03400
]
NHP190003_11620
Enzymes [BR:
hgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHP190003_11620
DNA repair and recombination proteins [BR:
hgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHP190003_11620
MMR (mismatch excision repair)
Other MMR factors
NHP190003_11620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCZ17880
LinkDB
All DBs
Position
complement(1107449..1109437)
Genome browser
AA seq
662 aa
AA seq
DB search
MGLNPEQLQATQAPLGANLVIASAGTGKTSTIVGRILHLLESGIDPKKILLLTFTNKASQ
EMKARLAQHTSKAAFIEAGTFHAIAYRHLTTLDPTLCLKQPREMQTLLKSVLEQDHSIKE
DCAYGASHLYDLYSYYLNAQSQQSFGDWLLDRNAKQADYIERYECALELFSELKKEQNYV
DYNDLLLRYKDTMANKPPAFIEVLCDEYQDTNPLQDAVLDALRPQSLFCVGDYDQSIYAF
NGADISIISNFSTKYKQAQVFTLQKNYRSSRAILNLANKVIAHNPRIYPKQLEVVKTTNP
STPTLLQYNELFGQYKGIAAHIARGGGFEEVAILFRNNSSAEGCEAALRELGVPSRRKGG
VGFFDTKEVKLLLDICAFLSYSKDMMATMQVLGYGSGIGNALAKDLYLALQILGDGNSLQ
GLLKPNNKNPYPQVKRPQMGLFESIVPLAAPNHQVSGAFKNHPLLTHPKLTQAAASFLDQ
LYTLCKTHTPKLPAQSLVHIAQSVWFQEIATSLAKERAKTKDGHIDKNLYESAQVKIKQR
VDLSVQLATSYKNLRDFLHAMVLGSKEMASGSGVQLLSVHASKGLEFGTVYVIDLMEGRF
PNTKLAKQSGSLEEERRLFYVAVTRAKDHLYLSYAKEDKMKKAAYQPSRFLMEAGLLTSK
NC
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaaaccccgaacagctccaagccacacaagcccccctaggggcgaatttagtc
atcgcctcggcgggcacgggcaagacttctaccattgtggggcggattttgcacctgcta
gaaagcggcattgaccctaagaaaatcttactgctcaccttcactaacaaggccagccaa
gaaatgaaagcaagactcgcccagcacaccagcaaggccgctttcattgaagcggggaca
ttccatgccatcgcctaccgccatttaacaacccttgaccccactctatgcctcaagcaa
cctagagagatgcaaaccctgctaaagagcgttttagagcaggaccacagcatcaaagaa
gattgcgcctatggggcgagccacttatatgacctttactcctactatctcaacgcccag
agtcagcaaagttttggggattggcttttagatcgcaatgccaaacaagctgactacatt
gagcgttacgaatgcgccctagagctttttagcgagcttaaaaaagaacaaaattatgtg
gattacaacgatttgttgttgcgctacaaggacacgatggcaaacaagccccccgccttc
atagaggtgctgtgcgatgaataccaagacaccaaccccctgcaagatgcggtgctagac
gctttacgcccccaaagcttattttgcgtgggcgattacgatcaaagcatttacgccttc
aatggggcggacatttctatcatcagcaacttctccactaagtacaaacaagcccaagtc
ttcactttgcaaaaaaactaccgctccagccgcgcgattttaaaccttgcgaataaagtg
attgcccacaacccgcgcatttaccccaagcaattagaagtggtgaaaaccaccaacccc
tccacccccaccctcttgcaatacaacgagctgtttgggcaatacaagggcattgcggcg
cacatcgccagagggggggggtttgaagaagtggcgattttgtttagaaacaactctagt
gctgaggggtgcgaggcggctttaagggagcttggcgtgccctcaaggcgtaagggaggg
gtggggttctttgacactaaggaagtgaagttgctcttagacatctgcgcctttttgagc
tactctaaggacatgatggcgaccatgcaggtgcttggctatggcagtgggatcggcaac
gctttggccaaagacctttatttggccttgcagattttaggcgatggcaatagtttacaa
ggactcttaaagcccaacaacaaaaacccctacccacaggtcaaacgcccccaaatgggc
ttgtttgaatccattgtgcccctagccgcgcccaaccaccaagtgagcggtgcgtttaaa
aaccacccccttttaacccaccccaagctcacccaagccgccgcctcgtttttagatcag
ctttacaccctttgcaagacccatacccccaaattgcccgcacaaagcctagtccacatt
gcccagtcggtgtggtttcaagagatcgctacaagcctagccaaagagcgcgcaaaaacc
aaggatgggcatattgataagaacttatacgagagtgcacaggttaagatcaagcaaagg
gtggacttgtcggtacagcttgccacaagttataaaaacttgcgcgactttttacacgcg
atggtgctcggctctaaagagatggcaagcgggagcggggtgcagctcttaagcgtgcat
gcaagcaaggggctggagtttggcacggtgtatgtgatcgacttaatggaggggcgtttt
cctaacactaaattggccaaacagagtggcagcctggaggaagagcggcgcttgttttat
gtcgccgtaacacgggctaaagatcacctgtatttgtcctatgccaaagaggataaaatg
aaaaaagccgcttaccaaccttcgcggtttttaatggaggcagggttgttaacctctaaa
aattgttaa
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