Helicobacter gastrocanis: NHP190003_12550
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Entry
NHP190003_12550 CDS
T10845
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hgs Helicobacter gastrocanis
Brite
KEGG Orthology (KO) [BR:
hgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hgs03009
]
NHP190003_12550 (rimO)
Enzymes [BR:
hgs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NHP190003_12550 (rimO)
Ribosome biogenesis [BR:
hgs03009
]
Prokaryotic type
ribosomal protein modification factors
NHP190003_12550 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CTD1
Motif
Other DBs
NCBI-ProteinID:
BCZ17973
LinkDB
All DBs
Position
1212810..1214105
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AA seq
431 aa
AA seq
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MPKLHLVSLGCSKNLVDSEVMLGKLAHYELTSDLGSADAIIVNTCGFIKSAKEESIRVLL
EAIEGRKKGALVVASGCLSQRYKEELAKELPEIDIFTGVGDYDQIDTLLAHKQSQFSKQV
FLASQHARTIIGSSVHAYVKLSEGCNQNCSFCAIPSFKGRLQSKRIEDILNEVEGLAKRG
YTDISFIAQDSSSYLQDQGVKEGLVQLIKAIDRQGVLKSARIFYLYPTTTTHKLIETIAS
SPIFANYFDMPIQHITDSMLKTMRRNSTKAKHLELLKAMRAVPGSFLRSTLLLGHPHEQE
SDINELEAFLQEFHFDRLNLFAFSAEEGTKAYGMPQIASKLVNERLDHINALVQEQVQTS
MQNLLGQTLEVIVEGASEDHLFLRARDRRWGLEIDGEILINESALEHTPPGHYKALCHTY
EEGVLVGKIVA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaaattacatttggtttctttggggtgctccaaaaatcttgtggatagcgaggtg
atgcttggcaaactcgcccactacgaactcaccagcgatctgggcagtgccgatgcgatc
attgtcaacacttgcggattcataaagtccgccaaagaggagagcattagagtcttgcta
gaagccattgaggggcgcaaaaagggggctttggtcgtggcaagtggttgccttagccaa
cgctataaagaggagctcgccaaagagttgcccgaaatcgatattttcacgggcgtgggc
gattacgaccaaatagacacgctcttagcgcacaaacaaagccaattttctaagcaagtc
tttttagccagccaacacgcccgcaccatcatcggctcatccgtgcatgcctatgtcaaa
ttgtctgaggggtgcaaccaaaattgtagtttctgtgcgattccaagttttaaagggcgc
ttgcaaagcaagcgtatagaggacattttaaacgaagtggagggcttggccaaaaggggt
tacacagacatcagcttcatcgcccaagattctagctcttacttgcaagatcaaggcgta
aaagaggggctagtacagctcattaaagccatcgacaggcagggtgtgcttaagagtgct
cggattttttatctctaccccaccaccaccacgcacaaactcattgaaacgatcgcaagc
tcgcctatttttgcaaattactttgacatgcccatccagcacatcacagactccatgctc
aaaaccatgcgccgcaactccacaaaagccaagcatttagagcttttaaaagccatgcgt
gctgtgccgggcagctttctacgctctactttgctcttaggccacccgcacgagcaagag
agcgacatcaacgagctagaggcgtttttacaagagtttcattttgaccgcttaaatctc
tttgccttcagtgcagaagagggcactaaggcttatggcatgccccaaattgcgagcaag
cttgtcaatgaacggctcgatcacatcaacgctttggtgcaagaacaggtgcaaacctct
atgcaaaacctgctcgggcagactttagaggtgatcgtggagggggctagcgaggatcat
ctctttttgcgtgcccgtgatcggcgttggggcttggagattgacggggagattctcatc
aatgaaagtgcattagagcacacccccccggggcattacaaagctctttgccacacctat
gaagagggggtacttgtgggcaagatcgtggcttaa
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