Helicobacter gastrocanis: NHP190003_15330
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Entry
NHP190003_15330 CDS
T10845
Name
(GenBank) hypothetical protein
Organism
hgs Helicobacter gastrocanis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VacA2
Motif
Other DBs
NCBI-ProteinID:
BCZ18251
UniProt:
A0ABM7SC44
LinkDB
All DBs
Position
1478678..1488805
Genome browser
AA seq
3375 aa
AA seq
DB search
MVYISLDGKTIKESFGSNALTFSLYVPPPPKPKPQDKPQNPSANTPNAGQSGPNIAGTGG
DSGPSGTTNPNGSGAQGQDKGTHTAGAQGSGSSSGTDNSGDNTHTASGTQGQDQHNTAGN
QGTGTTTSGQPANPTASSGTGQATGNTGGTAQGSHTASSGTSSAGSGNSGGNTHTTQGSG
DSGNNTHTAGSTQGTHTADSGTPGQDQHNAAGNSGQGGHSGNAHSASDGSGSGSGTTAGD
QGKGAPAGTQGAPTAGSGDRGSGPGGQGQGQGKNPQGDHNTAQGGGQGGSGGQQGGTHIA
QGSPGVTPPQPIPQNVNSMDIWKDVYDMDNSQTWSPNVGTNGIAYIDPSHNHSDPGYNQP
GLPQNSLTANATYQAWPPHNYTGSSTAVQGNNATLVIGNDQIKAVGLNDPRSVVWLDPSE
SGTEHSETSLQADNVFMTNNFFIGRTSSTDGTGNIGITANKTFTMDGLQFTAYSGTGSAI
SNYSWDKFKSLGSLNIQNSQFANGGGALYFSTPTASVNNAQFSGNGTTIGFDAFNQTNPS
VVNNNPNTNNITPGQMSFANTTFSEKAGGHILINGSSVDLGTSIQGTKYTGTSPASGAVR
FSGNNTDIAIASTTGNISATSTSFKEQAGGNISLKSGQNLTIGASSANPTNDSSYTSAFI
GNNTNINLQASGALSVANTLFNDPLQNANSPQNMTLAGASITLNNNKFEGYSQYHFNTNS
LTLQGTTTIATNNYLNKSNVATSPFSTYAGNVSFGSKALLDLSNTQEILNALQDDNTYTL
LSGKNIDYASDTAYAKNLWQMVQFGGQSATLATQGLPQGATQGQNGIYYVSLDGQTIEET
FGAKSLTLSLLNQEKDVWGDVYTMTPGCSPAAGGGCIGWPHWYDIVHGGYKTYSPNVGTN
GIAYIDPTHQEAEGWSNGNTLSTYTGTGNGMHLQVQGTNNTLVIGNDTKQAATGGIVRLG
GINGIYKIDVGYITDTFNAANIFMTNTFQTGNAAKTGGGANVSFTATNNITLDGLNYQNL
KAGTQHSNASFVSSGDITATNSNFVDNSGGVFNFHGQNDTFTNSTFSGDSSQINIDASNS
LSLTNTNLNNGMSTINLNATNTLTMGPSADSAPSTAEVPTSAINAKALNVSAQTATFNNT
SFTLDPTSNTTSQFKVNHLTFNNDTFEGIGSTYSFSGTQNTTFLGTNTIATTDLSNNPNS
PFKSLGGNVTLGSNARFDVSSPLTYNKTYTLVSGSHINWRDDSYAKELWGLVQYQGMSAI
SAQSTGNDSYIVEFGGLSTPIKVKETFNNNEIQLTLISQIQDIWPDVHQMTTTGWRADPA
HWCTPYTNSKCNYTYTYNTNNNPDYVAYIDPNLKNGAYPYSNPGGKLLSTYSATANGANY
DVEGQGTLIIGNNTNAAATGGTIWFGIQNTAQWDDHCVIGCGTITDTFNAYNVYLTNTIK
IGQFALGGGASMTYTARNNLTADGLNYDQIATVFPGMQTNASQHSSAYFIANKNMSILNS
NFNDASWGLFSFSAHNGNLNFTGSQVQGSETAVTLDSPNVALTNTNFYLGQGSNLNIENS
NQGGGGTLSATGSTFSLNEKSHATFGTNANFNNSTVLLNNGASASFGSGGTFAGNSALDA
DNSTLSVSGNASFSNGAVLSLINHAVANLQAATFADNANVNVDQGSQANFSGAVTFNDTS
SLNVNGTGASATLGAATFNAGTHMILNGGASATIKGAATFNGGNVNLNNSALSVGGNATL
NSANFALQGTSSFDISGGASSSGTTNLSLYGTDPLSVGQNFGVSGVLNFKGASNPSSVPL
VKVGGTFDLSKTGILDLSNVDLSTALGASPKVYNIVDARSIQGISGADGYQKIDFYGMQI
QNATYNATNNSWSFANPLNGAELITERIENGDLSVTISSNPNPIATNLFNIAPELFYYKQ
SKQNITGTDYDYSDDRVGTFFLDSNFKGVFIPPATSKINPIQPEIPGTYDGYNQPLDPLN
IYNAGISQADFGPLMGIASTLWPALEKLLASGVLNNLSDPAKVMQALGSVQINLTPAQKQ
ELLNVIAGFDSKINQTFQNGNLVVGGTELGQVNSTSKVWFGGNGYAGTCTSGPSCQELRN
TYLGQLFGSTGVDLGYIEANFNAKNIYITGTVGSGNSWHIGGSAEVSFNSATNLVLNQAN
IEAQGTDQIFPLLGAQGLDKILSQPGLGGVLGNLIYQKSLGESLVPQGLSLPGSIANETL
GQIFSAQDLGEVFTIPGMANILKDILSSKTVGSLLGSGGLISSLSQSEQDKIYGMLSNEI
EKGLDTLSPAAKAAAQAGLGVAGGVQGVQHLINTFYSKDTLLTLIDQIAPMTGMTLNQAL
SQANSPQATAAMQKFLNDTTFGQVFSQIIQNSGLINKTVSWLGPQILTDIMDMAIADALN
PLKALQNMAEDVGIKILDQVLGANTMDTLKNLTNQKAISNILDSIIDNKGLGALWANGLG
SVLPPNIQKVLQKAGVGALLAPKGLSALWEKGYFSFAAHENVLSNNSNYSNETGGTLSFI
AGNQIVFSGKNNISFSNYQGTLNFFSNKQSNIDLTSLNATDGLNLNAQFENLNIAGGTIA
LNQYESLAVSAQNFNFLGTINDTGGLIDLTGITGANVIGTMNLQGASTLKTNNLSIAKAL
DNQSTNAINVGGDLTLYSGATLTTQAQGINVGGALNSQGSYVFNLNPNSGNTATSNTGTQ
GASGGASGAESGTSTGTNSSGGNTGVQSASSAGASGGMSQNAGNSQSQSASTGTDIGSAN
SQSANSSANSTSSVAVQNTGFSALSVGGTNNQSASGADSQSTDNTSGADNGQNQSANSSS
GASSASNTPITPNTPLVQVQGIATLDASSNTMITFQGDAANTYTLLDSQKWMRYGLYQQN
FDPNSWKDYLTLYTYLNINGKSMQLNKQGNGLTYNGQAVKIADRGLLVSYQNAQGQTIQA
SIAFDNIKLGVNKNLNVGMPNIEQYIAHIQGEGSVRAVYAAGGPGVMGWLNQLLIDTKNT
PLFAAYYLEDNSQANLVKIAKDIANSIDLVASPTLKATTSRLLQINTFTQQMSRLAKLSS
FASNDTLPDFHDFLVSLKGKKFASAVPNDMDIITAYSQRNKLKNNLWITGVGGASFVAGG
TGTLYGVNMGYDRFIKGVIVGGYAAYGYSGFYGNITNSASNNVNVGVYSRAFLKGRHEIT
GSANETWGYNNAYINATDPILSIVNQRYNYSTWTTNLRANYGYDFFFKNKRVILKPQIGL
AYYYIGLSGLQGTMNNPFYNQFKANADPANKSVLTLNLALESRHYFNKNSYYFVLASIGR
DLFVHSMGDKVVRFIGDDMLSYRNGGMYNTFAGLTTGGEIRLFRSFYINASIGARFGLDY
QDINITGNVGMRYAF
NT seq
10128 nt
NT seq
+upstream
nt +downstream
nt
atggtatacatttctttagacggcaaaacgatcaaggaaagttttggctctaatgcgctc
accttttcgctgtatgtaccccccccccccaaacccaaaccccaagataagccccaaaac
cctagtgcaaacacgcctaacgcggggcaaagtggccccaacatcgccggcacaggcggg
gatagcggcccaagtggcaccactaaccccaatggcagtggcgcacagggacaagacaag
ggcacacacacagcgggcgcacagggttcgggttctagttcgggcacggacaattccgga
gacaacacccacacagctagtggcacacaagggcaagaccagcacaacaccgcgggcaat
caaggcacaggcacgaccacttcggggcaaccagctaaccccacagccagcagtggcaca
gggcaagctacaggcaatacagggggcactgcacaaggcagccacaccgcaagttcgggc
acttctagcgcaggttcgggcaattcgggtggcaacacccacaccacgcagggcagtggc
gattcaggcaacaacacccacacagccggcagcacacaaggcacacatacagcagacagc
ggcacgccagggcaagaccagcacaacgccgcgggcaactcagggcagggggggcattca
gggaacgcacacagtgccagcgatggctcgggtagtggcagtggcacaaccgccggcgac
cagggtaagggcgcaccggcgggcacacagggtgcccccaccgctggcagtggagatcgt
ggctcgggcccaggagggcagggacaaggacaggggaaaaacccccaaggcgaccacaac
accgcacaaggcgggggacaagggggcagtggagggcaacagggcggcacgcacatcgcg
caaggttcgcccggtgttacgccgccccaacccatcccacaaaatgtcaacagcatggac
atttggaaagatgtctatgacatggataattcgcaaacctggtccccgaatgtggggact
aatggcattgcctatattgacccctcccacaaccacagcgacccgggctataaccaaccc
ggtctgccccaaaactccctaaccgccaacgccacttaccaagcatggccccctcataac
tacaccggctctagcactgccgtacagggcaacaatgcaactttagtcatcggcaacgac
caaattaaggctgtggggctaaacgacccccgctccgttgtttggctcgatcctagtgaa
agcggcacggagcattccgaaaccagcctacaagccgacaatgtcttcatgaccaataac
tttttcattgggcgcacgagcagcacggatggcacgggcaacattgggatcaccgccaat
aaaactttcacaatggatggcttgcaattcactgcttacagcggtacaggcagcgcgatc
agcaactattcttgggacaagtttaaatctttaggcagtttgaatatccaaaactcccaa
tttgctaatggagggggtgcgctctactttagcacccccacggccagcgtcaacaacgcc
caattcagcggtaatggcacgaccatcggctttgatgccttcaaccagacaaaccctagt
gttgtcaacaataaccccaacaccaacaacatcacccccgggcaaatgagctttgccaac
accacctttagcgaaaaggccggggggcacatcctcatcaatggcagcagtgttgattta
ggcaccagcattcaaggcacaaaatacaccggcacttcccccgccagcggggcggtgcgc
tttagcggcaacaacacagacattgccatcgcctccaccaccggcaacatcagcgccacc
agcaccagctttaaagaacaggcggggggcaacatcagtttaaaaagcgggcaaaacctc
accatcggtgccagcagcgcaaaccccaccaacgacagctcttacacaagcgcctttatc
ggcaacaacaccaacatcaacctacaagccagcggggccctgagtgtcgccaacaccctc
tttaacgaccctctgcaaaatgccaatagcccgcaaaacatgaccttagcgggtgcgtcc
atcaccctaaacaacaataaatttgagggctattcgcaataccacttcaacacaaacagc
ctcactttgcagggcaccaccaccattgccaccaacaactacctaaataagagcaatgtg
gcgacaagcccctttagcacctatgcgggcaatgtcagctttggatctaaagccctgttg
gatttaagcaacacgcaagagattttaaacgccctgcaagatgacaacacttatacgctc
ttaagcggcaagaacatcgattatgccagcgacaccgcctacgctaaaaatctatggcaa
atggtgcaatttggcggacagagcgcaaccctagcgacacaaggcctgccacagggggct
acacaggggcaaaatggcatttactatgtgtctttagacgggcagaccattgaggaaact
ttcggagcgaagtctttaaccttgtcgttgcttaatcaagaaaaagatgtttggggggat
gtctataccatgacacctgggtgttctccagcagctgggggggggtgtatcggttggcct
cattggtatgacattgtccatgggggttataaaacttatagtccaaatgtggggactaat
ggaatcgcctatattgacccgacacaccaagaggcagagggctggagcaatggcaacact
ttaagcacctacacaggcacaggcaatggcatgcacttgcaggtacaagggaccaacaac
actttagtgattggcaacgacaccaagcaagcggccacgggaggcattgtgcgtttgggg
gggattaacgggatttataaaatcgatgtgggctacatcacagacacctttaacgccgcc
aatatttttatgaccaacaccttccaaacaggcaatgcggcgaaaacggggggtggggcg
aatgtgagcttcaccgctacaaataacatcaccttagacgggctcaattaccaaaacctc
aaggccgggacccaacactccaacgctagctttgtgtctagcggggacatcaccgccaca
aatagcaattttgtagataattcggggggggtctttaacttccacggccaaaacgacacc
ttcacaaactccaccttttcgggggacagcagccaaatcaacatcgatgccagcaattct
ttaagcctcaccaacacaaacttaaacaatggcatgagcacgattaatttaaacgctaca
aacaccctcacaatggggccaagtgcagacagcgcgcctagcacggccgaagtccccact
agtgcaatcaacgctaaggccttgaatgtaagtgcccaaacggcgaccttcaacaacacc
agcttcactctagaccccacaagcaacaccacctctcaatttaaagtcaatcacctcacc
tttaacaacgacacctttgaggggatcggcagcacttatagctttagtggcacacaaaac
acgacctttttaggcacaaacacgatcgccaccacggatctaagcaacaaccccaatagc
cccttcaagtcgttgggcgggaatgttactttgggatctaatgcgcgctttgatgtgtct
agtcccctgacctataacaaaacctacactttggtctcaggctctcacattaattggcgt
gatgacagctacgccaaagagctatggggcttggtacaataccaggggatgagcgcgatc
agcgcgcaaagcacgggcaacgactcttatattgtggaatttgggggtctcagcacgccc
attaaagtgaaagaaacctttaacaacaatgaaatccaactcactttaatcagccaaatc
caagacatttggccggatgtgcaccaaatgaccaccacaggctggagggccgaccccgcg
cactggtgcacgccttacaccaactccaagtgcaactacacctacacctacaacacgaac
aacaaccccgactatgtcgcctacattgacccgaatttaaaaaacggggcctacccctac
agcaacccgggtggcaagctcttaagcacctacagcgccaccgccaatggggcaaattac
gatgtagaggggcaggggactttaatcattggcaataacaccaacgcagcggccacggga
ggcacgatttggtttggcatccaaaacaccgcccaatgggatgatcattgcgtgataggt
tgtgggaccatcactgacaccttcaacgcctacaatgtctacctcaccaacaccattaaa
atagggcagtttgccctaggcgggggggcgagcatgacctacaccgcccgcaacaatctc
accgccgatggactcaactacgaccaaatcgccacggtctttcccggcatgcaaacaaac
gccagccagcactccagcgcctatttcatcgccaacaaaaacatgtccatcctcaactct
aacttcaacgatgcgagctgggggctttttagcttcagtgcccacaacggcaatttgaac
ttcacgggcagccaggtgcagggcagcgaaacggccgtaacgctagactcgcccaatgtg
gccctcaccaacaccaatttttatttggggcagggcagcaatttaaacattgaaaacagc
aatcaaggaggcggggggactctcagcgccacaggcagcacctttagcctcaatgagaaa
agccacgccacatttggcacaaacgccaatttcaacaacagcacagtgttgctcaacaat
ggcgcgagcgcgagctttggcagtgggggcacttttgccggcaatagtgccctagatgcc
gacaacagcaccctaagtgtcagtggcaatgccagctttagcaatggggcggtgctaagc
ctcatcaaccacgccgtggcaaacttgcaagccgccacttttgccgacaatgcgaatgtc
aatgttgatcagggctctcaggccaacttcagcggtgcggttaccttcaacgacacctct
agcttaaatgtcaacgggacgggggcgagcgccactttgggcgcggccactttcaatgcg
ggtacacacatgatcttaaatggcggggcgagcgccaccatcaagggtgcggccactttc
aacgggggcaatgtcaacctcaacaacagtgctttaagcgtggggggcaacgccacctta
aacagcgccaacttcgccctgcaaggcacatccagctttgacatcagcgggggggccagc
agcagcgggaccacgaatttaagcctatatgggacagacccgctcagtgtggggcagaac
tttggcgtgagcggggttttgaatttcaaaggggcgagcaacccctctagcgttccgcta
gtcaaagtgggcggcacctttgatttgagcaaaacgggcatcctagacctctctaatgtg
gatttgtccacagcccttggggcctcgcctaaagtttataacatcgtggacgctaggagc
attcaggggatcagtggggcggatggctaccaaaaaattgacttttatggcatgcaaatc
caaaacgccacctacaacgccactaataacagctggagttttgccaaccccttaaatgga
gccgagctcatcacagagcgcattgaaaacggggatttgagcgtaaccatctcgagcaat
ccaaaccccatcgctaccaaccttttcaacatcgctcccgagctgttctattacaaacaa
tccaagcaaaacatcacaggcacagactatgattacagcgatgatcgggtggggactttc
tttttagacagcaattttaaaggggtgttcatcccccccgccacctccaaaatcaacccg
atccaacctgagattccgggcacttatgatggctacaaccaacccctagacccgctcaac
atctacaatgcggggatcagccaagcggattttggacctctaatgggcatcgcctccact
ctgtggcctgccctagaaaaactcttggcctctggggtgctaaacaacttgagcgatcca
gccaaagtgatgcaggccttaggcagcgtgcagatcaatttaacccctgcacaaaagcag
gagttgctcaatgtcatcgccggctttgacagcaaaatcaaccaaaccttccaaaacggc
aatttagtcgtggggggcacagagctagggcaggtcaacagcaccagcaaggtgtggttt
gggggcaatggctatgccggtacttgcacgagcgggcctagctgtcaggaattaaggaac
acctacctaggccagttgtttggctcaacaggggtggatttgggctacattgaggccaac
ttcaacgccaagaacatttacattacagggactgtgggtagcggcaactcgtggcacatc
gggggctctgctgaagtgagcttcaacagcgctacaaatttggtgttgaatcaagccaac
atcgaggcgcagggtacggatcaaatcttccccctgcttggcgcgcagggcttggataaa
atcctaagccagcccgggcttggcggagttttaggcaatttgatttatcaaaaaagctta
ggcgagagccttgtaccccaagggctgtccttgcccggctccatcgccaacgaaacttta
gggcaaatctttagtgcccaggacctaggcgaggtcttcacgatccctggcatggcaaac
atcttaaaagacatcttgagctctaagaccgtgggctctctgcttggcagcggcgggctc
atcagcagtttgagccaaagcgagcaggataaaatctatggcatgctctctaacgagatc
gagaaagggctagacaccctatcgcccgcagccaaagccgcagcacaagcggggctcggc
gttgcggggggcgtgcaaggtgtccagcacctcatcaacaccttctactccaaagacacg
cttttaaccttaatcgatcaaatcgcacccatgacgggcatgaccttgaatcaagccctc
tcgcaagccaactctccgcaagccacagcggccatgcaaaagttcttaaacgacacgacc
tttgggcaagtctttagccaaatcatacaaaacagcggactcatcaacaaaaccgtgtcg
tggctaggtcctcagatcctaaccgacatcatggacatggcgattgcggacgcgctcaac
cccctaaaagccctgcaaaacatggccgaggatgtgggaatcaaaattttagatcaggtg
ctaggtgccaacacgatggacaccctgaaaaacttgaccaaccaaaaggccatcagcaat
atcctagacagcatcattgacaacaaggggctgggcgcgctgtgggccaatgggctagga
agtgtgctgccccccaatatccaaaaagtcctgcaaaaagcaggtgtgggggctctccta
gcgcccaaagggcttagcgcgctttgggaaaaggggtatttcagcttcgccgcccacgaa
aatgtgctgagcaacaacagcaattacagcaatgaaacggggggaactttaagcttcatt
gcgggcaaccaaatcgtcttcagcggcaaaaacaacatcagctttagcaactatcagggc
acgctcaatttcttctctaacaagcagtctaacattgatctcaccagcctcaacgccaca
gatgggctgaacttaaacgcccaatttgagaacctcaatatcgctggaggtacaattgcg
ctcaaccaatacgagtcgctggccgtgagtgcgcaaaactttaacttcctaggtacgatc
aacgacacgggcggactcatagaccttacaggcatcacgggggctaatgtcatcggcacg
atgaatttacaaggggcgagcaccttaaaaacaaataacttaagcatcgccaaagccctt
gataaccaaagcaccaatgcgatcaatgtaggcggcgatttgaccctctactcgggtgcg
accttgaccacacaggcgcagggcatcaatgtcggcggagcactaaatagtcagggtagt
tatgtctttaacctcaaccccaacagcggcaacaccgctacaagcaacaccggcacacag
ggcgcaagcggtggtgcaagcggggcagagagcggcacaagcacgggcacaaatagcagt
ggcggcaacaccggagtgcaaagcgcgagcagtgcaggtgcaagtgggggcatgagtcaa
aatgcgggcaactcccaaagccaaagtgctagcacgggcacagatattggcagtgcaaac
agccaaagcgcaaatagcagcgcaaatagcacaagcagtgtggcggtgcaaaatacgggc
tttagtgcccttagtgtcggtggtacaaacaaccaaagtgctagcggggcagacagccaa
agtacggacaatacaagcggtgcagacaacggccaaaaccaaagtgcaaatagcagcagt
ggtgcgagcagtgcaagcaacacacctataacccccaacacgcccttagtgcaagtgcag
ggcatcgccacgctagatgccagcagcaacaccatgatcaccttccaaggcgatgcggcc
aacacctacaccttgctagacagccaaaaatggatgcgctatggcttatatcaacaaaac
ttcgaccccaacagctggaaggattatttaaccctctacacctatctaaacatcaatggc
aagagcatgcagctcaataaacaaggcaatggattgacttacaacgggcaggcggtgaag
atcgccgatcggggcttgttggtgagttatcaaaacgctcaaggccaaaccatccaagcc
tccatcgcctttgacaacatcaagctaggggtcaataaaaatttaaatgtcggcatgcca
aacattgagcaatacattgcccacatccaaggcgagggcagcgtgagggcggtttacgcc
gctggaggtcccggggtgatgggctggttaaaccaattgctcatcgacaccaagaacaca
cccctatttgccgcctactacttagaggacaactcccaagctaacttagtaaaaatcgct
aaagacatcgccaacagcatagacttggtggccagccccactttaaaagccaccacctct
aggctcttgcaaatcaacaccttcacacaacaaatgagtcgcctagccaaactctctagt
tttgcgagcaacgacactctccccgactttcacgactttttagtgagcctaaagggcaaa
aagtttgccagcgcggtacctaatgacatggacatcatcaccgcctattcgcaacgcaat
aaattgaaaaataacctatggatcacaggcgtgggaggggcgagcttcgtggctggaggc
acgggcacgctctatggggtgaacatgggttacgaccgcttcatcaaaggcgtgattgtg
ggcggatatgccgcctatggctacagcggcttttatggcaacatcaccaactctgcgtcc
aacaatgtcaatgtgggggtttacagccgggcgttcttaaagggacgccatgaaatcacg
ggcagcgcgaacgaaacttgggggtacaacaatgcctacatcaacgccacagacccgatt
ttatccatcgtgaatcaacgctacaactacagcacatggacgaccaacctacgcgccaac
tatggctatgactttttctttaaaaacaaaagggtgattttaaaaccccaaatcggcttg
gcttactactatattggcttgtccggcttgcagggcacgatgaacaaccccttttacaac
caatttaaagccaatgccgacccggccaataaatccgtgttaaccttgaatttagcccta
gagagtcgccattacttcaataaaaactcttactactttgtcttggcgagcatcgggcgg
gatttgttcgtgcattctatgggcgataaggttgtgcgcttcatcggggatgacatgcta
agttatcgcaatggggggatgtacaacacctttgcggggctcaccacggggggagagatt
cgcttgtttaggtctttctacatcaatgccagcatcggggcgcgttttgggctggattat
caagacatcaacatcacgggcaatgtggggatgcgctatgccttctaa
DBGET
integrated database retrieval system
