Halorhodospira halophila: Hhal_0122
Help
Entry
Hhal_0122 CDS
T00462
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hha
Halorhodospira halophila
Pathway
hha03410
Base excision repair
hha03430
Mismatch repair
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hhal_0122
03430 Mismatch repair
Hhal_0122
03440 Homologous recombination
Hhal_0122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_0122
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Hhal_0122
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hhal_0122
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hhal_0122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABM60916
UniProt:
A1WTA4
LinkDB
All DBs
Position
complement(139745..141481)
Genome browser
AA seq
578 aa
AA seq
DB search
MPEHIRRRPAGAALPEDAVEGLHPVLRRVYERRGLRDSGELDLSLRRLQPPSGLADLDRA
VRALIPALRAGQRIVVVGDYDADGATATALMVLALRRLAKAAGGDPAAIESFVPDRFSLG
YGLSGAVVERLRPMEPDWLVTVDNGVTSVEGVAAARQAGMGVVVTDHHAPGESLPAAEAV
VDPLREDDHFPTTALAGVGVAFYLALALRRGLEADGGLREETASLLELLDLVAVGTVADL
VPLDHNNRILVEQGLRRIRAGVVRPGIVALLEVAGREPTEVTAADLAFAVGPRLNAAGRM
DDMTAGVDCLLEEDPQRARERAAGLDGLNRQRREVEAQMTEEALASLEAQAEDVGLGVCV
AARGWHQGVTGILASRLKERYHRPAVAFAPADGGRLRGSARSVPGLHMRDLLARIHARSP
SLIECFGGHAMAAGLTIESGQLDAFRRAFAGALDDALGGELPKLRLETDGALAPEELNLE
TAWALRYGGPWGQGFPEPCFDGVFRIERAKELRGGHLRLELSNGDGTGPVFPAIAFGGVE
RGWDRLQGAVHAIYRPEVNRFRGSVELQLRIDYLTAAG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcacatccggcggcgtccagcgggtgcggcacttccggaagacgctgttgag
gggctgcaccccgttttgcggcgtgtctatgaacggcgggggctgcgcgattccggggaa
ctcgatctgagtctgcgccggctgcaaccgccgagtggcctggccgatctggatcgcgca
gtccgcgcgctgatacccgccctgcgcgccgggcagcggatcgtcgtggtcggggattac
gacgccgatggagccacggccaccgcgctgatggtgctggctctccggcggctggcgaag
gccgccggcggcgatccagccgcaatcgaatcctttgtacccgaccggttctccctcggc
tacggcctcagtggggccgttgtcgagcgtctgcgcccgatggaaccggattggctggtg
acagtggacaacggtgtgaccagcgtggaaggggttgcagcggcgcggcaggcgggtatg
ggtgtcgtggtcaccgaccaccatgcgccgggggagtcgctgcccgcagccgaggcggtg
gtagatcccctgcgcgaggatgatcacttcccgactaccgcactggcgggggtcggggtg
gcgttctacctggcgctggcgctgcggcgtggccttgaggccgatggcggcctccgagaa
gagacggcgtcgctgctcgagctcctcgacctcgtggcggtggggaccgtcgccgacctg
gtgcctctcgatcacaacaaccgcatcctggtggagcaggggctgcggcggatccgtgcc
ggtgtggtgcgcccaggcattgtcgcactgttggaggtagccggccgggagcccacggag
gtgacggctgccgatctcgctttcgccgtgggaccgcgcctgaatgccgccgggcggatg
gacgacatgacggctggggtcgactgcctgctcgaagaggatccgcagcgggcccgtgag
cgggcggcggggctggatggtctcaatcgccagcggcgcgaggtggaggcgcagatgacc
gaagaggccctggccagcctggaggcgcaggcagaagacgtgggcctcggcgtctgtgtg
gccgcgcggggctggcaccagggtgtcaccggtattctggcatcgcggctgaaggagcgc
taccaccgcccggcggtggccttcgccccggccgacgggggtaggctgcggggctccgcg
cggtcggtgccggggctgcacatgcgcgacctgctggcgcgcatccacgcgcgttcaccg
agcctgatcgagtgtttcggcggccacgccatggccgcggggctgaccatcgagtccggg
cagctggatgcgtttcgccgtgccttcgccggcgccctcgacgacgccttggggggcgag
ttgcccaagctccgcttggagaccgatggtgccctggcgccggaggagctcaatctggag
accgcctgggccctgcgctacggcgggccgtgggggcagggattcccggagccgtgcttc
gacggggtgttccggatcgagagggccaaggaactccgcggtggccacctccgcctggag
ctctccaacggagacggtaccggtccggttttcccggctatcgcattcggtggcgtcgaa
cgggggtgggatcggctgcagggcgcggttcatgccatctaccgccccgaggtcaaccgg
ttccgggggagtgtcgagctgcagctacgcatcgactacctcactgccgccggatga
DBGET
integrated database retrieval system
