Halorhodospira halophila: Hhal_0477
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Entry
Hhal_0477 CDS
T00462
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
hha
Halorhodospira halophila
Pathway
hha02020
Two-component system
hha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hhal_0477
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Hhal_0477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hha03021
]
Hhal_0477
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hha02035
]
Hhal_0477
Transcription machinery [BR:
hha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hhal_0477
Bacterial motility proteins [BR:
hha02035
]
Flagellar system
Flagellar assembly proteins
Stator
Hhal_0477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
GerE
HTH_AsnC-type
UPF0122
MarR_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABM61265
UniProt:
A1WUA3
LinkDB
All DBs
Position
complement(545656..546399)
Genome browser
AA seq
247 aa
AA seq
DB search
MNGHAMYTAVAQQGDEDLVTRHASLVKRIAHHLASRLPPSVQLEDLIQAGMIGLLEAARQ
YDSSQGASFQTYAGIRIRGAMLDEMRRLDWTPRSVHRKGREVAEAIRTIEHQTGRDARDH
EVAEALGISVAEYHNILQDVSSAKVFSIDQEDPGTGEPHEPAGHEPGPLAMLQDEAFQGE
LAEAIRELPERERLVMALYYDEELNLREIGEVLGVSESRVSQIHGRIMLKLRNRLGEWRR
EQQERTA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcacgcgatgtacaccgcggtggcgcaacagggcgacgaggacctcgtcacc
cgccacgcctccctggtcaagcggatcgcccaccacctggccagccgcctgccgccgagc
gtgcagctcgaggatctgatccaggccggcatgatcggcctgctcgaggcggcgcgccag
tacgactcctcccagggcgcgagcttccagacctacgccgggatccgcatccgcggcgcc
atgctcgatgagatgcgccggcttgactggacgccgcgatcggtccaccgcaagggccgc
gaggtggccgaggcgatccgcaccatcgagcaccagaccgggcgggacgctcgcgaccac
gaagtggccgaggccctggggatctcggtggcggaataccacaatatcctgcaggatgtg
tcctcggcgaaagtcttcagcatcgatcaggaggatccgggcaccggcgaaccccacgag
cccgccgggcacgagccggggccgctggcgatgctgcaggacgaggcgtttcagggtgaa
ctggccgaggcgatccgcgagctgcctgagcgcgagcgtctggtcatggcgctctattac
gatgaggagctcaacctgcgcgaaatcggtgaggtcctcggggtctcggagtcgcgggtc
agccagatccacggccggatcatgctcaagctgcgcaatcgcctcggcgagtggcggcgc
gagcagcaggaacgaacggcttag
DBGET
integrated database retrieval system
