Halorhodospira halophila: Hhal_0562
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Entry
Hhal_0562 CDS
T00462
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
hha
Halorhodospira halophila
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hha03032
]
Hhal_0562
03036 Chromosome and associated proteins [BR:
hha03036
]
Hhal_0562
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_0562
DNA replication proteins [BR:
hha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hhal_0562
Chromosome and associated proteins [BR:
hha03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Hhal_0562
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Hhal_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
DUF3008
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABM61348
UniProt:
A1WUI6
LinkDB
All DBs
Position
complement(636577..636885)
Genome browser
AA seq
102 aa
AA seq
DB search
MTKSELIEAIASKQPHLAHKDVEDAVKKMLEHMSETLANGKRIEIRGFGSFSLHHRPARM
GRNPKTGEPVALPAKYVPHFKPGKELRERVNSSRHQAPLRSQ
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtccgagctcatcgaggccatcgcgtccaagcagccgcatctggcgcataag
gacgtcgaggacgctgtcaaaaagatgctcgagcacatgagcgagaccctggccaacggc
aagcggatcgagatccgtggcttcgggagcttctccctgcaccatcgcccagcgcggatg
ggccgcaaccccaagaccggggaacccgtggcgctgccagcgaagtacgtgccacacttc
aagccgggtaaagagctgcgggagcgcgtgaacagcagccgccaccaggcgccgctgcgc
tcgcagtga
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integrated database retrieval system
