Halorhodospira halophila: Hhal_1269
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Entry
Hhal_1269 CDS
T00462
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hha
Halorhodospira halophila
Pathway
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hhal_1269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_1269
Enzymes [BR:
hha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Hhal_1269
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hhal_1269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
AAA_16
UvrD-helicase
AAA_28
PhoH
AAA_5
DUF4350
nSTAND3
SLFN-g3_helicase
Mg_chelatase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABM62044
UniProt:
A1WWI2
LinkDB
All DBs
Position
complement(1376249..1378291)
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AA seq
680 aa
AA seq
DB search
MSVRVDQEAILRWLREAEALGWLRPLDGALAEFLREQVPDAPPLLLLAAALTSHQAGRGH
VCLDLDQLWERAEPVLSLPPETVDAPEPVKSPAALLDAAGGRDAFERQLECPELVGRGPG
STPLVRDGPRLYLRRYWACERTIARVVQQRVDAAAQWRAQLDPATVRRWLDGLFGAPGGD
GPDWQRVACAVAAGSGFSVITGGPGTGKTTTVLRLLALLQGLHGGALRIRLTAPTGKAAA
RLNASIAGAVDRLGLEELDGGAELRARIPTEVVTVHRLLGAGGGRRFRHHAGEPLAADVV
VVDEASMIDVELMAALLEALPDGGRLVLLGDKDQLASVEAGAILGELCARADQGGYWPDT
AEWLEAVSGQCIPSALIDPTGGGLDQHVVMLRHSHRFGADSGIGRLARAVNAGDQAAVEA
WGYGHEGDLARVQLADGEQDPTLIHWAVDGGQTGLGYAAYLSDIQELRPGPDASAGEYAG
WASQVLETHGAFQLLAALRRGPYGVEALNERLAAALRQRGLIRGEGAWYEGRPVIVTRND
YGLGLINGDIGIALRVPRFLVQSPEAGGAGEERQKVLRVAFRAADGSGRIRWVPPHRLES
VETAFALTVHKAQGSEFRHAALLLPDRPSPVLTRELLYTGITRASQWFTLLEPQPAVLKA
AVRQRTVRGGGLRAMLEAAG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgcgggtcgatcaggaggcgatcctcaggtggctgcgtgaggccgaggcgctg
ggctggctgcgcccgttggatggggccctggcggagttcctgcgtgagcaggtgcccgat
gcgccgccgctgctgttgctggccgcagcgctgaccagtcatcaggcgggccgtgggcat
gtctgcctggatctcgatcagctctgggaacgggccgagccggtcctgagccttccgccg
gagaccgttgacgcgcccgagccggtgaaatcgcccgcggcactcctggacgccgccggc
ggtcgcgatgcgttcgagcggcaattggagtgcccggaactggtgggcagaggccccggt
tccacaccgctggtccgcgacggaccgaggctctatctgcgccgctactgggcctgcgag
cgcaccatcgcacgggtggtgcagcagcgcgtggatgcagcggcgcagtggcgcgcgcag
ctcgacccggccacggtccggcgctggctggatgggttgttcggcgcgcctgggggcgat
ggcccggattggcagcgggtcgcctgtgccgtggccgccggcagtggtttcagtgttatc
accggcggaccgggtaccggcaagactacgacggtgttgcgtctgctggcgttgctgcag
gggctccacggcggggccctgcgcatccgcctgacggcccccaccggcaaggcggcggca
cggctgaacgcgagcatcgccggggcggtggatcggctggggctggaggagctggacggc
ggcgccgagctgcgcgcgcggatacccaccgaggtggtgacagtgcaccggctgctgggc
gcaggcggtggacggcgctttcgccaccacgccggggaacccctggccgcggatgtggtg
gtcgtggatgaagcgtcgatgatcgacgtggagttgatggcggcgttgctggaggccctg
ccggatgggggccgtctggtgctgcttggtgacaaggaccagttggcctcggtggaggcc
ggggccatccttggcgagctctgcgcccgggcagatcagggcggttattggcccgatacc
gccgagtggctagaggcggtcagcggccagtgcatcccgtcggcgctgatcgatcccacc
ggcggtggtctcgaccagcatgtcgtcatgcttcggcacagccaccggttcggtgccgac
agcgggatcgggcgcttggctcgggcggtgaatgccggtgatcaggcggcggtcgaggct
tgggggtatgggcacgagggcgatctggcgcgggtgcagcttgccgacggagagcaagac
ccgacgctgatccactgggcggtggacggcgggcagaccggcctgggctacgccgcttat
ctgagcgacatccaggaactgcgaccgggcccggatgcctccgctggggagtacgccggc
tgggcctcgcaggtgctggagacgcacggggcgttccaattgctggcggcgctgcggcgc
ggaccgtacggggtcgaggccctcaatgagcgccttgccgcggcgctgcgccagcggggg
ctgatccgaggtgagggggcctggtacgagggccgaccggtgatcgtcacgcgcaacgat
tacggcctggggctgatcaacggggatatcggcatcgccctgcgcgtcccgcgcttcctg
gtgcagagcccggaggcggggggtgccggggaggagcgacagaaggtgctgcgtgtcgcc
ttccgcgccgccgatggcagcggacgcatccgctgggtcccgccccatcggctggagtcc
gtggagacggcattcgccttgacggtgcacaaggcccagggttcggagtttcgccacgca
gccttattgctgccggatcggcccagtccggtgctcacccgtgagctcctctacaccggc
atcacccgggccagtcagtggttcaccctgctggagccgcaaccggccgtgctgaaggcg
gcggtgcgccagcgaaccgttcgtggtggcggcctgcgggccatgctcgaggctgctggc
tag
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