Halorhodospira halophila: Hhal_1271
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Entry
Hhal_1271 CDS
T00462
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hha
Halorhodospira halophila
Pathway
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hhal_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_1271
Enzymes [BR:
hha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Hhal_1271
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hhal_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABM62046
UniProt:
A1WWI4
LinkDB
All DBs
Position
complement(1381997..1385491)
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AA seq
1164 aa
AA seq
DB search
MAAEPSIEPGFLTIHGNRLEDLRQVAVEWVQRHPLAPLEDEVFLVQSNGMAQWLRLALAR
HPDSEQGGCGIAAAVSMQLPARFLWSVYRAVLGPEGAPRESPFGKDPLLWRLARLLPALR
DHPGFEPLRGFLADDPDGRKRYQLAARIADLFDQYQVYRADWLADWSRGEDVCRDARGQA
RDLDDTQRWQASLWRAVCAELAEVADEAGQATVHQLYRERIASLDTAPADLPRRVIVFGI
SSLPRQTLEALQELSRFAQVLVFVHNPCAFYWADIIADKDLLRADPGRRPRKAGMPEVLH
PEELHNHAHPLLAAWGKQGRDYIGLLDAHEDPQAHPHQALAQAGERIDLFRGPATGSLLG
QLQDDILHLRPLAETREAWPAVGREDASLQFHLAHSAQREVEVLHDRLLAAFSEDSSLRP
RDVIVMVPDIDAYAPHIEAVFGRFDAGDARHIPYTVADQGERGLDPLLIALEQLLSLPES
RCGLSDLLDLLEAPALRRRFGITEADLATLHGWAEEAGVRWGLNREQRAGLQLPEGLEQN
TWRFGLRRMLLGYAVGAGEAWSGVEPYPQVGGLDAALVGRLERLVGALEGTWGELREEAT
PERWGERLQRLLGTYFDPSGEVESLTLERLRDALEKWQRDCETGAFAEPLPLNVVREHWL
QALEDTRLSQRFLVGAVNFCTLMPMRAIPFRHVCLLGMNDGDYPRSPTPLDFDLMADDYR
PGDRSRREDDRYLFLEALLSARDRLYISWIGRSVRDNEPRPPSVLVGQLRDHLAAGWRLA
DEEEAGGLLEALTVEHPLQPFSRQNFRTEPSARHYTYAREWWAAHQGDEAGSGPRVTTLP
ERPVEDPPAPITPETLGALLKQPVQTFFNRRLGVRFEDDPLASEDQEPFGLDGLTRWQMR
EVLFLAGQEAAGDPEMRRERLAAEAQRLQRTGALPLGPAGTVWAETLQIEADEQLERYHR
HLATYPHELEPLQRLMHRHGDWQLEGGVDGIRSDGQRRVRLTHHLSRLGVKRREVRWRFD
LLATPWVTHLMANAAAEPLTTVVVGHDIDVALAPLEAGQAHEHLSQLLAGWAEAQRRPLP
VPCQPTCAWLTAQDEERGDPAAAAERVYAGDDYTWAAADAHDLRAFPRAADWLEDAAFPS
WRDALYAPLWRAVKEYAEDGDGHG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttggcggccgagccatccatcgaacctggtttcctgaccatccacggcaatcggctggaa
gaccttcggcaggtggccgtggagtgggtgcagcggcacccactcgcaccccttgaggac
gaggtgttcctggtccagagcaatggtatggcgcagtggctgcgcctggccttggctcgc
cacccggattcggagcagggcggttgcgggatcgctgcggcggtctcgatgcagttgccg
gcgcgctttctctggtcggtctaccgtgcggtcctaggcccggagggcgccccgcgggaa
tcccccttcggcaaggacccgctgctctggcggctcgcgcgcctgcttcccgcactccgc
gatcaccctgggtttgagccgctgcgcggcttcctggccgatgatcccgatgggcgcaag
cgttatcagctcgctgcacggattgcggatctctttgatcagtaccaggtctaccgtgcg
gactggttggcggactggtcgcggggcgaggacgtctgccgcgatgcacgtggacaggcg
cgcgatctggacgatacgcagcgctggcaggcttcgctctggcgtgcggtgtgcgcggaa
cttgccgaggtggcggacgaggcgggccaggccacggtccatcaactctaccgggagcgc
atcgcgagcctggacaccgcgccggcagacttgccgcgtcgggtgatcgtcttcggcatc
tcgtcgcttccgcgccagacactggaggcgctgcaggagctgtcgcgtttcgcccaggtg
ctcgtctttgttcacaatccctgcgccttctactgggcggatatcatcgcggataaggat
ctgctgcgtgccgaccccgggcggcggccacgcaaggccggcatgcccgaggtcctgcat
ccggaagagctgcacaatcacgcccaccccctgctcgccgcctggggcaagcaagggcgc
gactatatcggactgctggatgcccacgaggatccccaggcccatccgcaccaggccctg
gcccaggcgggcgagcgcatcgatctcttccgtggcccggcgaccggatctctgctcggc
cagctccaggacgatatcctccacctgcgtccgttggccgagacccgggaggcctggccg
gcggtcggccgcgaagatgcgtcgctgcaattccatctggcccacagcgcccagcgcgag
gtcgaggttctccatgaccggctgctcgccgctttctcggaggacagctcgctgcgcccg
cgcgatgtcatcgtgatggtgccggatatcgacgcttacgcaccgcacatcgaggccgtg
tttggtcgcttcgatgccggcgatgcgcgccacattccctatacggtggccgaccagggc
gagcgcgggctggatccgctgctcatcgccctggagcagcttttgagcctgcccgagtcg
cgttgcgggctgagtgacctgctcgatctgctcgaggcgccggcgttgcggcggcgtttc
gggatcaccgaggcggacctggccaccctgcacggctgggcagaggaggccggggtccgc
tggggactcaatcgcgagcagcgcgccgggctgcagttgcccgagggactggagcagaat
acctggcgcttcggtctgcggcgtatgctgctcggctacgccgtcggcgccggggaggcc
tggtccggggtcgaaccgtatccgcaggtgggcgggctcgacgccgccctcgtcgggcgc
ctggagcggctggtcggcgccctggaaggcacctggggcgaactgcgcgaggaggccacc
ccggagcggtggggcgagcggctgcagcggctgctggggacctacttcgacccctccggc
gaggtggagtcgttgaccctggagcggctgcgcgatgccctggagaagtggcagcgtgac
tgcgagaccggggcgttcgccgagccgctgcctctgaacgtggtgcgcgagcactggctg
caggcgctggaggatacgcgactgagccagcgtttcctggtcggggcggtgaacttctgc
accctgatgcccatgcgcgcgatccccttccgccacgtctgcctgctcgggatgaacgat
ggcgactacccgcgcagccccacccccctggatttcgatctgatggctgacgattaccgg
cccggcgaccgctcgcgccgcgaggacgatcgctacctcttcctggaggcgctcctctcg
gcccgggatcggctctacatcagctggatcggccgcagcgtgcgtgataacgagccacgt
ccgccttcggtgctggtcggtcagctgcgcgatcacctggccgccggctggcgcctggcc
gacgaggaggaggccggcggtctgctcgaggcgttgaccgtggagcacccgctgcagccg
ttcagccgccagaatttccgcacggagccctcggcgcgccactacacctacgcccgcgag
tggtgggcggcccatcagggcgatgaagccgggtccgggccgcgggtcacgacgctgccc
gagcggccggtggaggatccgccggcgccgatcacacccgaaaccctgggggcgttgctc
aagcagcccgtacagaccttcttcaaccgtcgcctgggggtccggttcgaggatgatcca
ctggccagcgaggatcaggagcccttcgggctcgacgggctgacacgctggcagatgcgc
gaggtgctcttcctggccgggcaggaggcggccggggatcccgagatgcgccgcgaacgg
ctggccgccgaggcgcagcggttgcagcgcaccggcgcgctgccgctgggcccggccggt
accgtctgggccgagacgcttcagatcgaagccgatgagcagctggagcgctaccaccgg
catctggctacctatccccatgagctggagccgctgcagcggctgatgcaccgccatggg
gattggcagctggagggcggggtggatgggatccgcagtgacgggcagcggcgcgtgcgc
ctgacgcaccacctcagccgcctgggggtcaagcgccgggaggtacgctggcgctttgac
ctgcttgccacgccgtgggtcacccacctgatggccaacgcggccgcggagccgctgacg
accgtggtcgtcggacacgacatcgacgtggccctggcgccgctggaggcggggcaggcc
cacgagcacctgagccagctgctcgccggctgggccgaggcgcagcgccggccgctgccg
gtgccctgccagccgacctgcgcctggctgaccgcgcaggacgaggagcgcggtgatccg
gcggccgcggccgaacgggtctatgccggggatgactacacgtgggcggccgccgacgcc
cacgatctgcgcgccttcccgcgggcggcggactggctggaggatgcggccttcccgagc
tggcgcgacgcgctctacgcgcccctgtggcgggcggtcaaggagtacgcggaggacggc
gatgggcacggctga
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