Halorhodospira halophila: Hhal_1453
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Entry
Hhal_1453 CDS
T00462
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hha
Halorhodospira halophila
Pathway
hha03030
DNA replication
hha03430
Mismatch repair
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hhal_1453
03430 Mismatch repair
Hhal_1453
03440 Homologous recombination
Hhal_1453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hha03032
]
Hhal_1453
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_1453
Enzymes [BR:
hha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hhal_1453
DNA replication proteins [BR:
hha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hhal_1453
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hhal_1453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
DUF2911
Motif
Other DBs
NCBI-ProteinID:
ABM62220
UniProt:
A1WX08
LinkDB
All DBs
Position
complement(1565794..1569345)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSEDPPPFVHLRLHSEFSLVDGIVRINEAVSAAREAGMPAVAITDQSNLFGMVKFYRAAL
AAGVKPIIGGDVWLADDTVEFGYARLTLLCRDRGGYRALSRLLSRAYREGACGDIPVIRR
EWLQADAGGLLALSGGAQGDIGQALLRGDEATARRYAEEHRRTFGEDGFYLELHRLGRPG
DERHLHAAVALAADEDLPVVATNDVRFMRPEDYDAHEVRVCIHQGRTLDDPNRPRHYTEQ
QYFADAADMAERFSDLPEALETSVRIAERCSVDLELDTNYLPDFPVPEGHTVASFLRAES
ERGLTQRLEQRGLAEDEDADEVEATYHRRLDHELAVIEQMGFPGYFLIVADFIRWARDNH
IPVGPGRGSGAGSLVAYALGITNLDPLRYDLLFERFLNPERVSMPDFDVDFCMERRDEVI
EYVSDRYGAEKVSQIATHGTMAARAVVRDVGRVYGHAFGYMDRIAKLIPFEIGMTLDKAL
EQEEDLRAEYDNDENIRELIDTARSLEGMARNVGKHAGGVVIAPTDLTDFSPLYRDPEER
EDAEAWKVATHFDKDDVEAVGLVKFDFLGLRTLTIIDWTVQAVNRILEQRGERALDIDGI
PLDDSATFDLLKRCATTAVFQLESRGMKELIKRLQPDSFEDIVALVALFRPGPLQSGMVD
DFVERKHGRSAVAGYPTRELHHPDLMPVLQPTYGVILYQEQVQRIAQVLAGYSLGEADLL
RRAMGKKKPEEMAKQRAKFLEGAQARGLSEGHATGIFDLMEKFAGYGFNKSHSAAYALLS
YQTAWLKCHFPAPFMASVLSSDMDNTDKVVIFLDEARAMGLEVLPPDVNRSDKPFRAVDE
RTIVYGLGAIKGVGESALDAVLGERDAHGPFGDVFDLCRRVDTGRANRRVLEALCRSGSL
DSLVPNRATGMAQIPAALAAAEQVTRDQAAGQTDLFGGPAEAVIAPGGAGEEVAEEPEWP
EEERLAAEKATLGLFLTGHPIDRYEHELPYLATDRLQRLASGAGGSGGDGNGGRGRSVTA
AGLVVALRVRSTSTGGRLATLTLDDRTGRIEVVLFPEAFSKNRHALEKDALLVVRGTLDY
DDFSGGYRITGEEVLDIAQARERAAGRLVIPVSAAHAANGLVPQLRQLLSSHAGDSPVHV
DYRHPRARGRVVFGRNWTVTPSDELIKRLEAVVDGRVGVEYPR
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaccctccgcccttcgtccacctgcgcttgcacagcgagttctcgctggtc
gacggcatcgtccgaatcaacgaggcggtgtcggcggcgcgcgaggccggtatgcccgcg
gtggccatcaccgatcagtcgaacctgttcgggatggtcaagttctaccgcgcggcgctg
gctgccggggtcaagccgatcatcggtggcgatgtgtggctggcggacgacaccgtggag
tttggctacgcccggctgacgctgctgtgccgggatcgcggtggctaccgggcgctgtcg
cgcctgctcagccgggcctatcgcgagggcgcctgcggcgacatcccggtgatccggcgg
gagtggctgcaggcggatgctggcgggctgttggccctctccggcggcgcccagggcgat
atcggccaggccctgttgcgcggtgacgaggccaccgcccggcgatacgccgaggaacac
cgccggactttcggcgaggacggcttctatctggagctccaccggctgggacggccgggg
gacgagcgccacctgcacgccgccgtcgcattggctgccgacgaggatctaccggtggtg
gcgaccaacgatgtccgcttcatgcgtccggaagactacgacgcccacgaggtgcgcgtc
tgtatccatcaggggcgcacgctggacgatcccaaccggccgcgccactacaccgagcag
cagtacttcgctgatgcggcggacatggctgagcgtttctccgacctgccggaggcgcta
gagactagcgtccgcattgccgagcgctgcagcgtcgacctggagctcgacaccaactac
ctcccggactttccggtccccgaggggcacacggtcgcctcgttcctgcgcgccgagtcc
gagcgtggcctgacacagcggctcgagcagcgcggtctggcggaggatgaagacgccgac
gaggtggaggcgacctatcatcggcggctcgatcacgagctggcggtcattgagcagatg
gggttcccggggtacttcctcattgtggctgacttcattcgctgggcgcgggataaccac
atcccggtggggccggggcgcggttccggggcgggctcactggtcgcctacgccttgggg
atcaccaacctcgatcccctgcgctacgatctgctcttcgagcgtttcttgaaccccgag
cgggtgtccatgcccgacttcgacgtggacttctgcatggagcgccgcgacgaggtcatc
gagtacgtctcggatcgttacggcgccgagaaggtctcacagatcgcgacccacggcacc
atggcggcgcgggccgtggtccgcgacgtggggcgcgtctacggtcacgccttcggttac
atggaccggatcgccaagctgatccccttcgagatcggcatgacgctggataaggcgttg
gagcaggaagaggacctgcgcgccgagtacgacaacgacgagaacatccgcgagttgatc
gataccgcgcgcagcctcgaggggatggcgcgcaacgtcggtaagcacgccggcggtgtg
gtgatcgcccccacggatctgaccgatttctcgcccctctaccgggatccggaggagcgc
gaagacgccgaagcctggaaggtggccacccacttcgacaaggacgacgtcgaggcggtg
ggcctggtcaagttcgacttcctcggtctgcgcacgctgaccatcatcgactggaccgtg
caggcggtgaatcgcatcctcgagcagcgcggtgagcgggcgctggatatcgacgggatc
ccgctggatgacagtgccaccttcgatctgctcaagcgctgcgccacgaccgccgtcttc
cagctggaatcccgcggcatgaaggagctgatcaagcggctccagcccgacagcttcgag
gatatcgtcgccctggtggcgctgttccggcccgggccgctgcagtcgggtatggtggat
gactttgtcgagcgcaagcacggccgctcggcggtggccggctacccgacccgggaactg
caccacccggatctgatgccggtgctccagcccacctacggcgtcatcctctaccaggag
caggtgcagcggattgcccaggtcctcgctggctacagcctgggggaggcggacctgctt
cgccgcgccatgggcaagaagaagcccgaggagatggccaaacaacgggccaaattcctc
gagggggcccaggcccgcggcctctccgagggtcacgccaccggcatcttcgacctgatg
gagaagttcgccggctacggcttcaacaagtcgcactcggcggcctatgcgctgctctcc
tatcagacggcgtggctcaagtgccactttcccgcgccgttcatggcctcggtgctgtcc
tcggacatggacaacaccgacaaggtggtgatctttctcgacgaggcccgggccatgggg
ctcgaggtgctgccgccggatgtcaatcgcagtgacaagccgttccgggcggtggacgag
cggaccatcgtctacggtctgggggccatcaagggggtcggggagtcggcgctcgatgcg
gtgctcggcgagcgcgatgcccatggccccttcggcgatgtcttcgacctgtgccggcgg
gtggacaccgggcgcgccaaccgccgggtgctggaggccctgtgccgttccgggagcctc
gacagtctggtccccaaccgcgccaccgggatggcgcagatcccggccgcgctggctgct
gccgagcaggtgacgcgggatcaggcggccgggcagaccgacctgttcggtggtcccgcc
gaggcggtgatcgccccaggcggggccggggaggaagtcgccgaggagcccgagtggccc
gaggaggagcgcctggccgccgagaaggccaccctcggcctctttctcaccggccacccg
atcgaccgctacgagcacgaactcccttacctggccaccgatcgcttgcaacgtctggcc
agcggcgccggcggtagtggcggggatgggaacggcggtcgggggcggtcggtgacggct
gccgggctggtggtggcgttgcgcgtgcggagcacttccaccgggggccgcctggcgacc
ctgactctggacgaccggaccggccggatcgaggtggtgctgttcccggaggcgttcagc
aagaatcgccacgccttggagaaggacgcgctactggtggttcgcggaacgctggattac
gacgacttcagcggcggctaccggatcaccggggaggaggtgctggacattgcccaggca
cgggaacgggcggccggacggttggtgatcccggtgagcgcagcgcacgctgccaacggg
ctggtgccgcaactgcgccagttgctcagcagccacgccggggacagcccggtccacgtc
gattaccgtcatccgcgggcccgcgggcgggtcgtcttcggtcgcaactggacggtgacg
cccagcgatgagctgatcaagcggctcgaggccgtggtcgacggacgggtcggggtcgag
tacccccgctaa
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