Halorhodospira halophila: Hhal_1679
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Entry
Hhal_1679 CDS
T00462
Name
(GenBank) DNA polymerase III alpha subunit-like protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hha
Halorhodospira halophila
Pathway
hha03030
DNA replication
hha03430
Mismatch repair
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hhal_1679
03430 Mismatch repair
Hhal_1679
03440 Homologous recombination
Hhal_1679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hha03032
]
Hhal_1679
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_1679
Enzymes [BR:
hha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hhal_1679
DNA replication proteins [BR:
hha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hhal_1679
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hhal_1679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
DNA_pol3_finger
DNA_pol3_alpha
Motif
Other DBs
NCBI-ProteinID:
ABM62443
UniProt:
A1WXN1
LinkDB
All DBs
Position
complement(1831992..1833764)
Genome browser
AA seq
590 aa
AA seq
DB search
MHDDATTIVPFRGGALERAAWDRLWDAADGGCVRRALGERRTRYQRRVEQEMAAFARLGL
EPGVLLELSWVVQDLRGRGVTFGPGYGPQSGSLLLHLLGLNGIDPIDHGLPFLGFGRELE
ARRLHLRVATRAEQAELGSALRQGGAAAAALPEQGIEVVVGRDPTLALTCEMVRLARALN
DNRDCDPLRWAYPWDDPDTLRLIARGETAGIPLLEDAQLQERMREAAPRSLEEVTQVVVA
ARDGAPHGLLERYRAARTGASRPPLPHPELEDILAPTGYIWLYREQVVAALARLLGCELA
EAVGLAQRLSEEGGDAHEGELSRQLGERIAARCQLPYARGLYLLRALRQGLAQVVDRAAT
LVEVTEAYRQAYYKARYPAVFQAARLNRALRRVTPRGGVRYGVGGGPDGVCPHREILIRL
CKEALSDGVTVLPPDINRSDWGFRPLDRNTVIYGLGAIAQIDRQTADRLVLRRRGGEYRS
LMDLIIRGFGGTAPAIQVEPLIFSGALDEFGRDRWHLRRELDEAQAVRGWQYAADGRTTH
SLAGGLDAWQAVHPGEGWAFQRELDVLACVPSRQYFPEPAPAERRLRPVR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgacgccacgaccatcgttccgttccgtgggggcgcgctggagcgcgccgcc
tgggatcggctttgggatgccgccgatggtggctgcgtgcgccgggccctcggcgagcgg
cgtacgcgctaccagcggcgcgtcgagcaggagatggcagcctttgcacgcctgggtctg
gagccgggggtgctgctggaactctcctgggtggtgcaggatctgcggggccgtggagtc
accttcgggccggggtacggcccgcagagcgggtcgctgctgctgcacctgctgggtctc
aacggtatcgatcccatcgatcacgggttgccgttcctcggcttcgggcgcgagctggag
gcccggcgtctgcacttgcgcgtcgccacccgcgccgagcaggcggaactgggctcggcg
ttgcgccaggggggtgcggccgctgcggcgctgccggaacaggggatcgaggtcgtggtg
gggcgcgacccgacgctcgccttgacctgcgagatggtccgcctggcccgtgcactcaac
gacaaccgcgactgcgatcccctgcgttgggcctatccgtgggatgatccggataccctg
cgcctgatcgcccgcggggagaccgccgggatcccgctgctggaggatgcgcagttgcag
gagcgcatgcgggaggcggcgccgcgcagtctcgaggaagtgacacaggtcgtggtggcg
gcccgagatggggcgccgcacggtctgctcgagcggtatcgggcggcgcgcacgggcgcg
agccgtccgccattgccccatcccgagctcgaggacatcctcgcccccacgggatacatc
tggctctaccgcgagcaggtggtcgcggcactggcccggttgctcggttgtgagctggcc
gaggcggtcggactcgcacaacggctaagcgaggaggggggcgatgcccacgagggggag
ctttcccggcagctcggcgagcgcatcgctgcccgttgccagcttccctacgcgcggggg
ctttatctgcttcgtgccctgcgccagggcctggcccaggtggtggatcgggcggccacg
ctggtcgaggtcaccgaggcttaccgtcaggcctactacaaggcacgctacccggcggtt
ttccaggctgcgcggctgaaccgggcgctgcggcgggtgacgcctcggggcggtgtgcgt
tatggggtgggaggcgggccggatggcgtctgtccgcatcgggagattctcattcgcctc
tgcaaggaggcgttgagtgacggtgtgaccgtgctgccaccggatatcaatcgcagcgac
tgggggtttcgccccctggatcggaacacggtgatctacggcctcggggcgattgcgcag
atcgaccggcagaccgccgaccgactggtgctgcgccgccgcgggggtgagtaccgcagc
ctgatggatctcatcatccgggggttcggaggcaccgcgccggcgatacaggttgagccg
ctgatcttctccggtgcgctggacgagttcggccgcgatcgctggcacttgcgcagggag
ctcgatgaggcgcaggccgtccgagggtggcaatacgccgcggatgggcggacaacccac
tctctggcgggcggtttggatgcctggcaggccgttcatcccggggagggatgggccttc
cagcgggaacttgatgtgctcgcctgtgtcccgtcacgtcagtactttccggaacctgcc
ccggccgaacggcgcttgcgcccggtccggtga
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