Halorhodospira halophila: Hhal_1708
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Entry
Hhal_1708 CDS
T00462
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hha
Halorhodospira halophila
Pathway
hha03420
Nucleotide excision repair
hha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hhal_1708
03430 Mismatch repair
Hhal_1708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_1708
Enzymes [BR:
hha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hhal_1708
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hhal_1708
MMR (mismatch excision repair)
Other MMR factors
Hhal_1708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
AAA_22
DEAD
AAA_12
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABM62472
UniProt:
A1WXR0
LinkDB
All DBs
Position
complement(1865673..1867760)
Genome browser
AA seq
695 aa
AA seq
DB search
MALTPEQRQVIEHPGGHARVSAAAGSGKTATLVARVVELLRRGADSARIRVLMFNRSARE
DFERRLAVAIREAGCQARVSVQTFHSAGYRLLQRLEAEGVVPRRRLESADWVARKLARTA
LEAALENRDEAEAVEDEAVDAFLAFVDVVKADTREAAVIHAEAPRLLGAALPGHYLEAFR
RFEALRDDQNVRLLNDLIHEPVQALLADDALARRFRNHFDHVIIDEYQDVNEAQQQLIRC
IAGDRAAVMVVGDPDQCVYQWRGARPEYIVRRFDEDFPGAASYTLPHTFRFGHAVALLGN
HTVVRNRQRDGKLCLAAPRNPATEVRRCTDSDPELYRRILAEHRATGGRLSDVAVLVRLY
SLAAPLELELLEAGVPLRLEGRAGLFQRREVRALLGYLRHAAGLLRDPLPDGAGPAELLT
EMLMLPVAGLRRPEAQAVAQGYADARLPLIRSLSRAAEDLPRWKGRRLRQRVASLECLGA
FHGDDPVADVLDEIVSELSLYEAIASGSPSAEAATDRSMMVDALRRFAASGGWGLTEFLE
RCDELIARSAQWQDAPPEQAVRVTSIHRAKGLEWPVVIVPGLAEGTFPYGVGEATAADLE
AERRLFYVAVTRAQHRLYLVHPQDPRLERALRGGRAEQFDPHRAVASRFLAEAQPEHSIA
AGAALHRGETPDKRLRTRVVGDYLAALQGHEVVTD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggctttaacccccgaacagcggcaggtcatcgagcacccgggtgggcacgcccgggtc
agtgctgcggccggttccggcaagacagcgaccctggtcgcgcgggtggtggaattgctg
cgccgcggcgccgattcggcgcgcatccgggtcctgatgttcaatcgctcggcccgcgaa
gatttcgagcggcgattggccgtagccatccgggaggccggctgccaggcccgggtttcg
gtacagacattccacagtgccggatatcggctgttgcagcgactcgaggccgagggtgtg
gtgccgcggcggcgcttggagagcgccgactgggtggcccgcaagctggcccgcacggcg
ctggaggcggcgctggagaaccgggacgaggcggaggccgtggaggacgaggccgtcgac
gcgttcctggccttcgtcgacgtggtcaaggcggacacccgcgaggcggccgtcatccac
gccgaggcgccccgcctgctgggagcggcactccccggccactacctggaggcgttccgc
cgcttcgaggcgttgcgcgatgatcaaaacgtgcgtctgctcaacgatctgatccacgag
ccggtccaggccctgctggcggatgatgccctggcgcggcggttccggaaccacttcgac
cacgtcatcatcgacgagtatcaggacgttaacgaggctcagcagcagctgatccgttgc
atcgccggtgaccgtgccgcggtgatggtcgtcggggatccggatcagtgcgtttaccag
tggcggggggcgcgaccggagtacatcgtgcgccgcttcgacgaggacttcccgggggct
gccagctataccctgccgcatacgttccgcttcggtcatgcggtggcgctgctgggtaat
cacacggtggtccgcaatcggcagcgggatggcaagctgtgcctggccgcgccccggaat
ccggccactgaggttcgtcgctgtaccgacagcgatccggaactctatcggcgcatcctc
gccgagcaccgcgcgaccggaggtcggttgtccgatgtggcggtgctggtgcgcctctac
agtctggccgcgccgctggagctggaactcctcgaggccggcgtgccattgcgtctcgag
gggcgtgcggggctgttccagcggcgggaggttcgtgcgttgctcggctatctgcgccat
gccgcggggctcctgcgtgaccccctgccggacggcgctgggccggccgagctgctgacc
gagatgctgatgctgccggtagccggcctgcgccggcccgaggcacaggcggtcgctcag
gggtacgccgatgcacggctgccgctgatccgcagcctgtcccgggcggccgaagacctg
ccgcgctggaagggtcgacggctgcgccaacgggtggcctcgctcgagtgtctgggggcg
ttccatggcgacgatccggtggcggatgtgctggatgagatcgtctcggaactgtcgctc
tacgaggccatcgccagtggctcgcccagcgccgaggcagccacggatcgcagcatgatg
gtcgatgccctgcgccgttttgctgccagcggaggatgggggctgaccgagttcctggag
cggtgcgacgaactcatcgcccgctcggcgcaatggcaggacgccccgccggagcaggcc
gtgcgcgtgacctcgatccaccgggccaaggggctggagtggccggtcgtcatcgtgccc
ggtctggccgagggtaccttcccctacggcgtcggagaggccaccgcggcggatctggag
gcagagcgccgcctgttctacgtggcggtgacccgcgcgcagcaccggctgtatctggtg
cacccgcaagatccgcggctggagcgggccctgcgcggtgggcgggccgagcagtttgat
ccgcaccgggcggtggcctcgcgctttctggccgaggcgcagccggagcactcgatcgcc
gccggggcggcgctgcatcggggcgagacgcccgacaagcggctgcgcacccgggtggtc
ggcgactacctggccgccttgcagggccacgaggtcgtcaccgactga
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