Halorhodospira halophila: Hhal_1902
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Entry
Hhal_1902 CDS
T00462
Name
(GenBank) putative PAS/PAC sensor protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hha
Halorhodospira halophila
Pathway
hha03030
DNA replication
hha03430
Mismatch repair
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hhal_1902
03430 Mismatch repair
Hhal_1902
03440 Homologous recombination
Hhal_1902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hha03032
]
Hhal_1902
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_1902
Enzymes [BR:
hha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hhal_1902
DNA replication proteins [BR:
hha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hhal_1902
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hhal_1902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
PAS_7
PAS
PAS_8
PAS_9
RNase_H_2
PAS_10
Yip1
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ABM62666
UniProt:
A1WYA4
LinkDB
All DBs
Position
2093831..2095954
Genome browser
AA seq
707 aa
AA seq
DB search
MASAMARRRLKFWAPALVLLLLIAAALATVGYLTLGHVPEGPERANALLALGGAGAVLIG
ATVAIWILLDATVIRPLGALARGASIMAHSNPAHELEIPSMHLLGELPESLQTLGSNLYE
TRREVAKALGSGAQGVENQKTRLEIVLREIQQGVIVCDTEGRVLLYNPAAGEILRSDALG
LGRSIYDVLARSAVDHTLEMLQHRLAIADDHTVAENRAEFVCATVDDGALLHCRMSLLPS
SSPLRSGFVLTIEDITRKIEGVARRDHALRTAVEALRPPLANLRAAAESLGQGDEAMARE
QRQSFETLMVHESRELSRRFERMARETHRLVSAPWTMADISSADLLASVLRRHPEGLPKV
EVVGIPLWMHAESHSIGLVLEHMLRHLRGELGIEQIRAEPLMGDQRVYLDLSWQGPPIPP
DQLETWLDEELPEATGQLTPRGVLERHDSVAWSQIQPRCEGRALLRIPVPLSRRQWEQPG
ERLPPRPEFYDFSLADQAADQGELLDRPLAQLSFVIFDTETTGLAPSEGDEIISIAGVRM
VNGRILEGECFEQLVNPGRPIPKASIKFHGIRDEMVADKPGIATVLPQFSAFVGDSVLVA
HNAAFDMKFIRLKEGQCGLKFENPVLDTLLLSVFLHDHTPEHTLEAIANRLGVEISGRHT
ALGDTLVTGEIFAQMLPLLEERGVTTLRDAINASEQMVEVRKQQAQF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgccatggcacgtcgccggttgaaattctgggcaccggcgctggtcctgctg
ctgctgatcgccgctgccctggccaccgtcggctacctgaccctgggacacgttcccgag
ggaccggagcgcgccaatgcgctgctcgccctgggaggcgccggcgcggtgctcatcggc
gccaccgtggccatctggatcctcctggacgccaccgtcatccgccccctgggcgcgctg
gcccgcggggcgtcgatcatggcccactcgaacccggcccacgaactggagatcccgagc
atgcacctgctcggcgagctcccggagagcctacagacgctgggcagcaacctctatgag
acccggcgcgaagtggccaaggccctgggctccggcgcccagggggtcgagaaccagaag
acgcggctggagatcgttctgcgcgagatccagcagggggtcatcgtctgcgacaccgag
ggccgggtgctgctctacaacccggccgccggcgagatcctgcgcagtgatgcactgggt
ctggggcgctccatctacgacgtgctggcccgctcggcggtggaccacaccctggagatg
ctccaacaccgcctggccatcgccgacgaccacaccgtggcggaaaaccgcgccgaattc
gtctgcgcgacggtggatgacggcgccctgctgcactgccggatgagcctgctcccctcc
tccagccccctgcgctcggggttcgtgctgaccatcgaggacatcacccgcaagattgaa
ggcgtagcccgccgcgaccacgccctgcgcaccgccgtggaggccctgcgcccgccgctg
gcgaacctgcgcgccgccgccgagagcctcggccagggcgacgaggccatggcccgcgag
cagcgccagtcgttcgagacgctcatggtccacgaaagccgggagctgagccgacgcttc
gagcgcatggcccgggagacccaccgactcgtctcggccccctggaccatggcggacatc
agcagcgcggacctattggccagcgtcctgcgccgccacccggagggattgccgaaggtc
gaggtggtcggcatcccgctgtggatgcacgccgagagccactccatcggcctggtactg
gagcacatgctgcgccacctgcgcggcgaactcggcatcgagcagatccgcgccgagccc
ctgatgggggatcagcgggtgtatctggatctctcctggcagggcccaccgatcccgccg
gatcagctcgagacgtggctggacgaggagctgcccgaggccaccgggcaactgaccccg
cgcggggtgctggagcgccacgacagcgtcgcctggagccagatacaacctcgctgcgaa
ggacgcgccctgctgcgcatcccggtgccgctatcgcggcgccagtgggagcagcccggc
gagcgcctgccaccgcggccggagttctacgacttctcgctggccgaccaggccgccgat
cagggcgagctgctcgatcgccccctggcccagctatcattcgtcatcttcgataccgag
accaccggactggccccctcggaaggcgacgagatcatctccatcgccggggtacgcatg
gtcaatggccgcatcctcgagggcgagtgcttcgagcagctggtcaaccccgggcggccg
atccccaaagcgtcgatcaagttccacggcatccgcgacgagatggtcgccgacaagccg
gggatcgccacggtgctgccgcagttcagcgccttcgtcggcgattccgtgctggtcgcc
cataacgccgccttcgacatgaagttcatccgcctcaaggaaggtcagtgcggcctgaag
ttcgaaaacccggtgctcgacaccctgctgctgtcggtcttcctgcacgatcacacccct
gagcacaccctggaggccatcgccaaccgcctgggggtggagatcagcggccgccacacg
gcgctgggcgacaccctggtcaccggcgagatcttcgcgcagatgctgccgctgctcgag
gagcgcggcgtcaccaccctgcgcgatgcgatcaacgcctccgaacagatggtcgaggtc
cgcaagcagcaggcccagttctaa
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