Halorhodospira halophila: Hhal_2311
Help
Entry
Hhal_2311 CDS
T00462
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hha
Halorhodospira halophila
Pathway
hha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hhal_2311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_2311
Enzymes [BR:
hha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Hhal_2311
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Hhal_2311
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hhal_2311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Auto_anti-p27
Zn_Ribbon_TF
zf_Rg
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-ProteinID:
ABM63074
UniProt:
A1WZG2
LinkDB
All DBs
Position
complement(2537419..2538231)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGLQVHLVGRTLQRVVVRQRQLRYPVPARVEAAVVGEEVVALERRAKYL
LIRLGGGAWLLLHLGMSGSLRLVAETDAPGRHDHVDLVLNDGRAVRLTDPRRFGCLLLGD
GDPQDHRLLRRLGPEPLGSAFDGAVLHRAARGRRVAVKALLMDATVVVGVGNIYANEALF
RAGIRPDRAAGRIARARYDRLAGAVRAVLEAALAAGGTTLRDFTDGSGEPGYFAVNLSVY
GASVCPVCGGALRQIRLAQRGTWFCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgagctgcccgaggttgagaccacccgtcgcggcctgcaggtccacctggtcggg
cgtaccctgcagcgcgtcgtggtacgccaacggcagctgcgctatcccgtgccggccagg
gtggaggccgccgtcgtcggtgaggaggtggtggccctggagcggcgcgccaagtatctg
ctgatccgccttggcggcggtgcctggctgttgctgcatctgggtatgtccgggagcctg
cggctggtggcggagaccgatgccccggggcggcacgaccatgtcgatctggtcctcaat
gatggccgtgccgtccgcctgaccgacccgcgccgttttggctgcctgctcctcggtgac
ggggacccgcaggaccaccggctgctccgccgccttggccccgagccgttgggatcggcc
ttcgatggggccgtgctgcaccgcgcggcccgtggccgtcgcgtggcggtgaaggccctg
ctgatggatgccaccgtcgtggtcggggtggggaatatctatgccaatgaggcgctcttt
cgtgccggtatccgcccggaccgagcggccgggcggatcgcccgggcccggtacgaccgc
ctggccggggccgtacgggcggtcctggaggcagcgctggcggcggggggcaccacgctg
cgcgatttcaccgacggttcgggtgagccgggatacttcgccgtgaatctgtccgtctat
ggcgcttcggtgtgcccggtctgcggcggcgcgctgcgccagatccggctggcgcagcgc
gggacctggttctgcccccggtgccagcgctag
DBGET
integrated database retrieval system
