Halorhodospira halophila: Hhal_2421
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Entry
Hhal_2421 CDS
T00462
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hha
Halorhodospira halophila
Pathway
hha03030
DNA replication
hha03410
Base excision repair
hha03420
Nucleotide excision repair
hha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hhal_2421
03410 Base excision repair
Hhal_2421
03420 Nucleotide excision repair
Hhal_2421
03440 Homologous recombination
Hhal_2421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hha03032
]
Hhal_2421
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_2421
Enzymes [BR:
hha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hhal_2421
DNA replication proteins [BR:
hha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Hhal_2421
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Hhal_2421
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hhal_2421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ABM63184
UniProt:
A1WZS2
LinkDB
All DBs
Position
complement(2658502..2661216)
Genome browser
AA seq
904 aa
AA seq
DB search
MTQPDDRLVLVDGSSYLYRAFHALPALTNANGEPTGALYGVVNMLHKLLAEEPEARFAVV
FDAPGKTFRDELFEQYKAHRPPMPDELRAQREPLKAIIAALGVPVLEVPGVEADDVIGTL
AARASGPVLISTTDKDMAQLVDEQVTLLNTMSGTRLDPEGVREKFGVPPELIRDYLALVG
DTSDNIPGVPKVGPKTAAKWLNAYGSLDALREQADEIRGKVGESLRAHLDELPLSVDLVT
IRCDLALEVAPEDLVRQSPDRETLGGLYQRYGMRRFLAELQAGDAAAAADGTGASLPPNA
PEVAYEVVLDDHGLAAWMERLRNADAFSIDLETNSLNYMDAEIVGVSLAVEPGQAAYLPV
AHCGPGAPDQLDRDRVLDALRPLLEAEQPEKMGQNLKYDMSVLARYGIELRGVAYDSMLE
SYVLDSTATRHDMDSLASKYLGVEVTSYEQLCGKGVRQVPFAEIDVERAGHYAAEDADIA
LRLHQLLYPRLQAESGLLRVFSQLEMPLLPVLSRMERHGVRVDCDLLERQSEELAGRMAE
VEQRAHEEAGEAFNLGSPKQIQEIFFERMGLPVIQRTPKGQPSTAESVLEELSARGHELP
RLILEHRGLSKLKSTYTDKLPQLIHRDTGRVHTSYHQAVAATGRLSSSDPNLQNIPVRTP
EGRRIRKAFVASPGHRLITADYSQVELRIMAHLSGDEGLRRAFEQGEDIHRATAAEVFAA
DEVNDEQRRAAKAINFGLIYGMSAWGLGRQLGIPRDEAQTYIDRYFERYPGVRAFMDRAR
EQAREQGYVETVFGRRLHVPEIHSRNRQRREYAERTAINAPMQGTAADVIKRAMIDVDAL
LNERFPESRLVMQVHDELVLEVPEAQATAVGDEVRRLMEGSDRGMVSVPLEVELGVGDDW
EQAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccggacgaccgcctggtcctggtggacggctcctcctacctctaccgcgcc
ttccacgccctgccggcactgaccaacgccaacggcgaaccgaccggggcgctctacggc
gtggttaacatgctccacaagctccttgccgaggagcccgaggcgcgcttcgccgtggtc
ttcgacgccccgggcaagacctttcgcgatgagctcttcgagcagtacaaggcgcaccgg
ccacccatgcccgatgaactgcgtgcccagcgggagccgctcaaggcgatcatcgctgcg
ctcggggtgccggtgctcgaggtgcccggtgtggaggccgacgatgtcatcgggaccctg
gccgcgcgcgcctcggggccggtcctgatttccaccacggacaaggacatggcgcagctg
gtggacgaacaggtgaccttgctcaacaccatgagcggcacccgtctggacccggagggg
gtgcgcgagaagtttggtgtcccccccgagttgatccgcgactacctggccctagtgggc
gacacctcggacaacatccccggtgttcccaaggtcggaccgaagaccgctgccaagtgg
ctcaatgcctacggcagcctcgacgcactgcgcgagcaggccgacgagatccgcggtaag
gtcggcgagagcctccgcgcccatctcgacgagctgccgctgtcggtggatctggtcacc
atccgctgcgacctggccctcgaggtcgccccggaggacctggttcgccagagcccggac
cgcgagaccctcggtgggctctatcagcgctacggtatgcgtcgcttcctcgccgagctg
caggccggcgacgccgccgccgcagccgacggcaccggcgccagtctcccccccaacgcg
cccgaggtggcctacgaggtggtcctcgacgaccacggtctcgccgcctggatggagcgg
ctacgcaacgccgatgccttctccatcgacctggagacgaacagcctcaactacatggat
gccgagatcgtcggcgtgtcgttggctgtcgagccggggcaggccgcctatctgcccgtg
gcccactgcgggcccggtgccccggaccagctcgaccgggaccgggtgctcgacgcgctg
cgccccctgctcgaggccgagcagccggagaagatgggtcagaacctcaagtacgacatg
agtgtcctggcccgctacgggatcgagctgcgcggggtggcctacgacagtatgctcgag
tcctacgtcctcgactccacggcgacccgccacgacatggactcgctggccagcaagtac
ctgggggtcgaggtcaccagctacgagcagctctgcggcaaaggggtgcggcaggtcccg
ttcgccgagatcgacgtcgagcgtgccggccactacgccgccgaggacgccgacatcgcg
ctgcgccttcatcaacttctttacccccggctgcaggccgaatcggggctgctgcgagtc
ttcagccaactcgagatgcccctgttgccggttctttcgcgcatggagcgccacggggtg
cgggtcgattgcgacctgctggagcgccagagcgaggagctggccgggcgcatggccgag
gtggagcagcgcgcccacgaggaggccggcgaggcgttcaacctcggctcacccaagcag
atccaggagatcttcttcgagcgtatgggattgcccgtgatccagcgcacccccaagggc
cagccgtctaccgccgagtcggtgctcgaagagctcagcgcgcggggccacgaactgccg
cggttgatccttgagcatcgggggctgtccaagctcaagtccacctataccgacaagctg
ccgcagctgatccaccgggacaccggtcgtgtgcacacctcctaccatcaggcggtggcg
gcgaccggacggctctcctcatccgatcccaacctgcagaacatcccggtgcgcaccccg
gaagggcggcgcatccgcaaggccttcgtggccagccccgggcaccggctgatcaccgcc
gattactcccaggtcgagcttcgcatcatggcccacctctccggcgatgagggcctgcgc
cgggccttcgagcagggcgaggacatccaccgcgccaccgccgccgaggtcttcgccgcc
gatgaggtcaacgacgagcagcgccgcgccgccaaggcgatcaacttcgggctgatctac
ggcatgtccgcctggggcctggggcggcagctgggcatcccgcgcgacgaggcgcagacc
tacatcgaccgttacttcgagcgctaccccggtgtgcgtgccttcatggatcgggcgcgc
gagcaggcccgggagcagggttatgtggagaccgtgtttggccgccgactgcacgtcccg
gagatccacagccgcaaccgtcagcgccgcgagtacgccgagcgcaccgccatcaatgcc
cctatgcaggggaccgcggcggatgtcatcaagcgggccatgatcgacgtcgacgccctg
ctcaatgagcgcttcccggagagccgactggtgatgcaggtgcacgatgagttggtgctc
gaggtccctgaggcgcaggcaacggcggtgggcgatgaggtgcgccggctgatggaggga
tcggatcgcggcatggtgtcggttcccttggaagtcgagctcggtgttggcgatgattgg
gaacaggcccactga
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