Halyomorpha halys (brown marmorated stink bug): 106679958
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Entry
106679958 CDS
T07536
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03008
Ribosome biogenesis in eukaryotes
hhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106679958
09123 Folding, sorting and degradation
03018 RNA degradation
106679958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhal03021
]
106679958
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106679958
03009 Ribosome biogenesis [BR:
hhal03009
]
106679958
03016 Transfer RNA biogenesis [BR:
hhal03016
]
106679958
Transcription machinery [BR:
hhal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106679958
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
106679958
Ribosome biogenesis [BR:
hhal03009
]
Eukaryotic type
Pre-60S particles
RNases
106679958
Transfer RNA biogenesis [BR:
hhal03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
106679958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
106679958
NCBI-ProteinID:
XP_014274858
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MGVPAFFRWLIRKYPSVIVDCVEELGEDGQEVDSTKPNPNGVEFDNLYLDMNGIIHPCTH
PENKPAPKDEDEMMLAIFKCIDRIFKIARPRKLLYLAVDGVAPRAKMNQQRSRRFRAAKE
GAEKVNQIALIRSQLEAKGVNLPLEKDKPSHFDSNCITPGTSFMSNLTECLNYYIYDRLA
SDPGWKNIKVILSDASVPGEGEHKIMDFIRRQRAHGDHDPNTHHCLCGADGDLIMLGLAT
HELYFTIIREEFVLNEPKRCNLCGQTGHELTECKGVGVVDNIDSSIMGAPTRYIFVRLNV
LREYLEEELKMPDLPFEYNFERALDDWVFMCFFVGNDFIPHLPSLEIREGAIDRLVILYK
KTLYRTGGFITDSGEVNLDRVQLIMTHLGQTEDQIFRKRRVNENNFRRRLKQKKLIEMRQ
TMNKSIEDEPEPIDEVKLWQGGYKERYYRLKFNCGGDNPEERYTIGFEYVIGLCWILKYY
YQGCASWKWYYPYHYAPFASDFVNIIRCNTCFEKNTSPFSPLEQLMSVFPAASSTLVPPT
WADLMTNPMSPILDFYPEDFMIDLNGKRFAWQGVALLPFVDENRLRRGLASVYKDLTNDE
VKRNKNGHDRLYIGIEADCFRFINELDPSIYQKKKAPLISDGAYGYVYIVQEEFNQGESI
PSPIRGLNTVMRNSTICVAFCDPKYSEDYKFRAIRLQGVIEPPRVLNFKDLGSKRTNTWR
NRNNFQQNWSSNKGQNENNSHPIIGMVPQTAQATLGESSFRMISHNLPHSLFIPLGTVWQ
HDVRPGEFNSGMRLYNENYPRDGSEIRFHPYRTRDVELGSSRFTNNGNFQRNRVRRRRNG
MARPHKN
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgggggttccagcatttttccgttggttgataagaaaatatccatctgtaattgtggac
tgtgttgaagaattgggagaagatggacaagaagttgattccactaagcctaatccaaat
ggtgtggaattcgataacctatatctcgatatgaatggcattatacatccttgtacacat
ccggaaaacaagccagctcctaaagatgaagatgaaatgatgctagctatttttaaatgc
attgatagaatttttaaaattgcgaggccacgtaaacttctttacttagctgtagatggc
gttgccccaagagcgaaaatgaatcagcaacggtctaggaggtttagggctgctaaggaa
ggagctgaaaaagtaaaccagattgctttgattaggtctcagctggaagcgaaaggtgtg
aacttacctctagaaaaggataaacctagtcatttcgacagcaattgtataactcctggt
acttctttcatgtccaatcttacggaatgtttaaattattacatatatgacagattagca
agtgatcctggctggaaaaatattaaagtgattttgtcagatgctagtgttccaggagaa
ggagaacacaaaattatggatttcatcaggaggcaaagggctcatggtgaccatgacccg
aatactcatcattgtttgtgtggtgctgatggtgacttgataatgcttggtctggcaact
cacgaactttacttcacgattattcgagaagagtttgttttaaatgagcctaaacgttgt
aatctctgtggtcagactggacatgagttgactgaatgtaaaggcgtgggcgtggttgac
aatatagacagctcaattatgggtgcccctactagatatatctttgtaagacttaatgtc
ctccgagaatatttagaagaagaattaaaaatgcctgatttaccttttgagtataacttt
gaaagagcattggatgattgggtatttatgtgttttttcgttggaaatgatttcatacct
cacttgccgtctcttgaaattcgtgagggggcaatagacaggcttgttatactttacaag
aagactctttatcgaacaggtggatttattactgatagcggtgaggtcaatctcgataga
gtacagctaatcatgactcatcttggccaaactgaagatcaaatatttcgaaaacgacga
gttaatgagaataatttcagacgacgtttaaaacaaaaaaagcttatagaaatgcgacaa
acaatgaataagagtattgaagatgaaccagaacctattgacgaagttaagctttggcaa
ggaggttataaagagaggtattataggcttaaattcaattgtggtggggacaatccagag
gaaagatacacaataggttttgaatacgtcattggcttatgctggatattgaaatattat
tatcagggttgtgcttcatggaaatggtattatccttatcattacgctccatttgcttct
gatttcgttaatattattcgttgtaatacatgctttgaaaagaacactagtcctttcagc
ccacttgagcaactgatgagtgtttttcctgctgcaagttctacactagttccacctact
tgggcagatttaatgactaatcccatgtctccgattttagacttttatcctgaagatttt
atgatcgatttaaatggtaaacgttttgcatggcaaggtgttgcgttattgccattcgtt
gatgaaaacagactaagaagaggactcgcttctgtttacaaagatctgactaatgatgaa
gttaaacgtaataaaaatggtcacgaccgtttgtacattgggatagaagcggattgtttc
cgattcattaatgaattagatccttccatttaccagaaaaagaaagcacctttaatatcg
gatggtgcttatggatatgtatatatagttcaagaggaatttaatcaaggagaaagtatt
ccttctcctatacgaggtcttaatactgttatgaggaattcaacaatttgtgttgccttc
tgtgaccctaagtattcagaggattataaatttagagctatcaggttgcaaggtgtcatt
gaacctcctcgagtactcaacttcaaagatttgggaagcaaaagaacaaatacctggcgt
aatcgtaacaattttcaacagaactggagttcaaataaggggcaaaatgaaaataactca
catcctattattggaatggttcctcaaactgcacaagcaaccttgggcgaatcttccttt
aggatgataagccataaccttccgcattcactatttattccattaggtacagtttggcaa
catgatgtaagacctggtgaatttaactcaggaatgagactgtacaacgaaaattaccca
agagatggtagtgaaattcgtttccatccttacagaacgagggatgttgaattaggaagt
agcaggttcacaaataatggcaattttcaacgtaatcgagtacgaagaagaagaaacgga
atggcaaggcctcataagaattaa
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