Halyomorpha halys (brown marmorated stink bug): 106680240
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Entry
106680240 CDS
T07536
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03013
Nucleocytoplasmic transport
hhal03015
mRNA surveillance pathway
hhal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106680240 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
106680240 (Hel25E)
03015 mRNA surveillance pathway
106680240 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106680240 (Hel25E)
03041 Spliceosome [BR:
hhal03041
]
106680240 (Hel25E)
Enzymes [BR:
hhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106680240 (Hel25E)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106680240 (Hel25E)
Spliceosome [BR:
hhal03041
]
Complex C
Other components
EJC/TREX
106680240 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106680240 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
RING-HC_RBR_RNF216
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
106680240
NCBI-ProteinID:
XP_014275277
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQPIVEGSGDTAPRKDVKGAYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQMELTENQVTVLVMCHT
RELAFQISKEYERFSKYMPNIKVAVFFGGLPIQKDEEVLKNNCPHIVVGTPGRILALVKN
KKLNLKNLKHFVLDECDKMLEQLDMRRDVQEIFRNTPHSKQVMMFSATLSKDIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFDLLDILEFNQVVIFVKSVQRCMA
LAQLLCDQNFPAVAIHRAMSQEERLAKYQEFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFASDEADAKVLNNVQDRFDVNITELPDEIDLSS
YIDGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgatttgttggattatgaagatgaagaacagacagaacaacctatt
gttgaaggttcaggagatactgctccccgcaaagatgtgaagggagcttatgtatcaatt
catagttcaggttttagagattttcttttaaagcctgaaattttaagagcaatagttgat
tgtggttttgagcatccttctgaagttcaacatgagtgcatacctcaagcagttcttggt
atggatatactttgccaagctaaatctggaatgggtaaaactgctgtgtttgtattagcc
acccttcaacaaatggagttgactgaaaatcaagtgacagttttggtcatgtgccatacc
agagaattggcatttcaaattagcaaagaatatgaacgtttttcaaaatatatgccaaac
attaaggtcgctgtgttttttggtggtttacctattcagaaggatgaagaagttttaaaa
aataactgtcctcacatcgtagttggtacaccaggacgtattttagctttagtgaagaat
aaaaaacttaatttgaaaaacctgaaacattttgtgttagatgagtgtgacaaaatgctt
gagcagttagacatgagacgtgatgttcaagaaatttttagaaatacacctcatagtaag
caagttatgatgtttagtgctactctcagtaaggatattaggccagtctgtaagaaattt
atgcaagatcccatggaagtttatgtagatgatgaagctaagctaaccctacatgggctt
cagcagcactatgttaaactcaaagaaaatgaaaaaaataaaaaattatttgatttactt
gacatcttagagtttaatcaggttgtaatatttgtaaaatcagttcagagatgtatggct
ttggctcaactgttatgtgatcagaatttccctgctgtagctatacatagagctatgagt
caagaagagagacttgctaagtaccaggaattcaaagactttcaaaagaggattcttgtt
gctaccaatttgtttggaagaggaatggatattgaaagagtaaacattgtatttaattat
gatatgccagaagattcagatacttatctccatagagtagcaagagcaggacgtttcgga
actaaggggttggcaattacatttgctagtgacgaggcagatgctaaagttctgaataat
gttcaggacagatttgatgttaatattactgagttacctgatgagattgacctttcgtct
tatattgatggacgataa
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