Halyomorpha halys (brown marmorated stink bug): 106680549
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Entry
106680549 CDS
T07536
Symbol
Mtr4
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106680549 (Mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106680549 (Mtr4)
03041 Spliceosome [BR:
hhal03041
]
106680549 (Mtr4)
03009 Ribosome biogenesis [BR:
hhal03009
]
106680549 (Mtr4)
03016 Transfer RNA biogenesis [BR:
hhal03016
]
106680549 (Mtr4)
Enzymes [BR:
hhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106680549 (Mtr4)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
106680549 (Mtr4)
Spliceosome [BR:
hhal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106680549 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
106680549 (Mtr4)
Ribosome biogenesis [BR:
hhal03009
]
Eukaryotic type
Pre-60S particles
Helicases
106680549 (Mtr4)
Transfer RNA biogenesis [BR:
hhal03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
106680549 (Mtr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
Helicase_dom4_arc
ATPase_2
nSTAND3
Anthrax-tox_M
YodE
Motif
Other DBs
NCBI-GeneID:
106680549
NCBI-ProteinID:
XP_014275817
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MNSLNLLFGAFQQPANSAQPTDTHASVDSKKRHFPEENTSEPYQKKQSLERDGSMNQSQS
ELDVSYQLKKARLISISNLDSIQIKIHTVEALEYCLHEVALPPHVEYKPLIKPKKLLKEY
KFILDPFQKEAIMCIENNESVLVSAHTSSGKTVVGEYAIIKSLNLKQRVIYTTPIKALSN
QKYREFQEEFKDVGLITGDVTINPTAGCLIMTTEILRNMLYRGSEVMREVSWVIFDEIHY
MRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVAHIHSQPCHVVYTDYRPTPL
QHFVFPVGGDCTHLIVDEKGVFNERNFELASKIVQDPGQGKKFENKKLNRRSDGKESSCL
KLIRMIMEKNLAPALIFSFSKKDCEIYAMQVAKLDFNTTEEKQLVDEIFQNAMDVLSEED
RCLPQVENVLPLLRRGIGIHHGGLLPILKETIEVLFSEGLIKALFATETFAMGLNMPAKS
VIFTGIKKFDGRNHRHITSGEYIQMSGRAGRRGLDDNGTVIVMLDEPLSTEEGKSLMQGK
ADALNSAFHLTYNMLLNLIRVDDINPEYLLERSFFQFQNHTNLPILRKQHEELEEEMSKI
VIENEKVVESYFILKKELNGLYAEYQTFIHKPEYLLPFLRPGRLVKACGRDRAEFGWGMV
LSHRRANQKNNNPMKVDKNILIDVLILIDSKSTEENPKPCPKNEVGKMVVISLTHHSIMD
LSTVCVVLPKDLRSADNQASAQMAYREVEERFKGDFPILDPLKNMNIEDTRFTFLVDKIA
ALKKRLEVHVANKIPEFEQVLETFQKKEGLRESLDNVANEIDKSMSLLQMEELRCRKRVL
RRLEFCTESDVIELKGRVACEISCADELLLTEMLLSGTFNDLTPQQSAALLSCFVCEEKS
NTHAKLSEELAKPFREAKELARKIIKVSKEAKMDINEDTYLDQMKPFLMDPVYSWCNGAT
FHEICKQTEIFEGSIIRCMRRLEELLRQLMQAAKTLGNQDLEVKFSMAINMIKRDIVFAA
SLYL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaactctttaaatcttctatttggtgctttccagcaacctgccaattccgcacaacct
actgacacccatgccagtgtagattccaaaaaaaggcattttcctgaggaaaatacttct
gaaccatatcaaaagaaacagagcttagaaagagatggcagtatgaatcagtcacaatct
gaattagatgtgtcttatcaactgaaaaaggcaagattaataagcatatctaatcttgac
agtattcagataaaaattcatactgtcgaagcgttagaatattgtcttcacgaagttgcc
cttcctccacatgtcgagtataagcctttaataaagcccaaaaaattgctgaaggaatat
aaatttattctagatccatttcaaaaagaagcaattatgtgtattgaaaataatgaatca
gtactagtttcggctcatacttcttctggaaaaactgttgtcggagaatatgctatcata
aaatcgttaaatttgaaacagagagtgatatatacaacaccgatcaaagcattgagcaat
cagaaataccgtgagtttcaagaagagtttaaagatgttggtctaattactggagatgtc
acaataaatccaactgcaggttgtctgataatgacaacggaaatcttaaggaacatgctt
tatcgaggttctgaagttatgagagaagtctcatgggtaatatttgatgaaattcattac
atgagggacaaggaacgtggtgtagtgtgggaagaaacgttgatccttcttcctgataat
gtacattatgttttcttgtctgctacgatacctaatgctcgtcagttcgctgagtgggtc
gcacatattcacagtcaaccatgtcatgttgtttatacagattataggcccacaccatta
cagcattttgtttttcctgtcggtggtgattgtactcatcttattgttgatgaaaaaggt
gtatttaatgaaaggaactttgaattagcttcaaaaatagtacaagaccctggtcagggg
aaaaaatttgaaaataagaagctcaatcgaaggtcagatggtaaagaatcaagttgttta
aagcttattagaatgattatggaaaaaaatcttgctcctgctctaatattttcttttagt
aaaaaagactgtgaaatatatgccatgcaagtagccaaattagactttaacactactgaa
gaaaaacagcttgttgacgaaatatttcaaaatgcaatggatgttttgtcagaagaggat
agatgtcttccccaagtagaaaacgttcttcctttgctgagaaggggcattggtatccat
catggagggctactacccatcctcaaggagactatcgaagttttgttttcagaaggactt
attaaggctttatttgctactgaaacttttgctatgggacttaacatgcctgccaaatct
gtcatttttactggcataaagaagtttgatggaagaaatcacagacatattacatcagga
gaatatattcaaatgtctgggcgtgctggtaggagaggattggatgacaatggaacagtc
attgtaatgcttgacgaacctttatctaccgaggaagggaaatcattgatgcaaggtaaa
gctgatgcactcaattcagcattccatctgacttataacatgcttcttaatctcatcagg
gttgatgatattaatcctgaatatttactcgaacgaagtttttttcagtttcagaatcat
accaatttacctattctgagaaaacagcatgaagaactcgaagaggaaatgtcaaaaatt
gttatcgaaaatgaaaaggttgtcgaatcatatttcattctgaaaaaagagttaaatggt
ttatatgcagagtaccaaacatttattcacaaaccagagtatttattgccatttttacga
cctgggaggttagttaaggcttgtggaagagatagagcagaatttgggtggggtatggtt
ttgtcccacagaagggcgaaccagaaaaataacaatcccatgaaggttgataaaaacatt
ctcatagatgtgcttattttgattgattccaaatctacagaagaaaatcccaaaccatgc
ccaaaaaatgaagttggtaaaatggttgtcatttccttaacccaccatagcataatggat
ttgagtactgtctgcgttgttttgcctaaagatttgaggtcagctgacaaccaagcctca
gctcaaatggcatacagagaagtggaggaacgtttcaaaggagattttcctattttagat
ccattaaagaatatgaacattgaagatactaggtttacatttcttgtggacaaaattgct
gctttaaagaaaaggttagaagtccatgtcgctaataaaattccagaatttgaacaggta
cttgagactttccaaaagaaggaaggactgagagaatctctggacaatgtagctaatgaa
attgacaaatccatgtcacttttacaaatggaagagctaagatgtagaaaacgtgtcttg
agaagattagaattctgtaccgaatcagatgtaatagaactgaaggggagagtagcctgt
gaaataagttgtgcagacgaattactgttgacggaaatgttactaagtggtacattcaac
gacttaacacctcaacaatcagcagcacttctctcctgcttcgtatgtgaggaaaaaagt
aatactcatgctaaattatctgaagaattagccaagcctttcagggaagccaaagagttg
gcgaggaagatcatcaaggtgtccaaggaggcaaaaatggatattaacgaggatacttat
ttagatcagatgaagccatttttgatggacccagtttattcttggtgcaatggtgctact
tttcacgaaatctgtaaacagacagaaatcttcgaagggagtattattcgttgcatgaga
cgtttagaagaattattgaggcaactaatgcaagcagcaaaaacattaggtaaccaggac
ctggaagtgaaattcagtatggctattaatatgataaaaagagacattgttttcgctgca
agcctttatctataa
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