Halyomorpha halys (brown marmorated stink bug): 106681295
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Entry
106681295 CDS
T07536
Symbol
Upf3
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03013
Nucleocytoplasmic transport
hhal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106681295 (Upf3)
03015 mRNA surveillance pathway
106681295 (Upf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106681295 (Upf3)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106681295 (Upf3)
mRNA cycle factors
P-body specific factors
106681295 (Upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
106681295
NCBI-ProteinID:
XP_014277025
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MEEEEPSSELINSTTIVEVSTPKDVGEDDLVSLDKTIQIENSSLKTSPREPVEATNPPEN
LDNKRRKVKEEKPHSKIVVRRLPPTMTKEMFLDQVSPLPEVDYMYYIQGDTNNGFNPFSR
AYLNFINQDDLFSFSRTFDNYVFLDAKGQEYPAVVEFAMFQRVPKQRPKKKDPLMGTIES
DPTYITFKENLLAEALENSKTGGKAVKQHYFETEISTAEEVNTTPLLEFLKVRRAEKARI
REERREEKKRKELERKLKQKTKDKKGEGDDEEPSKEAKIQHKPSEKDPAKEVNIERNKQV
GDNEKLGKESFDKSNVNFKKESSEKPTILQDQKFLIFNKSDKVEQQNENESQSKGNSSSN
DGAVESNADISSGDKNSVPDAEVQKIKEAEQQTMYLRKLLGLLPSDSQLSASKKEVLSKD
KRDNKERDSRNVKKKDDKERVKDTRIREFKSRGGKSYQEERLRLAERREEQKKRDLLNSG
DKKTEFDLGEADPGEGTGEQPKAPEEKTSRFEKKKYEYRKKYDNDDWKDEKKRSRNERSN
LKRDGRERKDDYRRNQDKKTSDSDLRRKVKTFKNSEFSKVMDDKKKSSAVHEEVDGKVQE
GTDKNKIEKKDSELSKDKWKSVDDLVLTSTVERKNSDKIVIENNDVIVGSKKRHSSLENL
RHEEKCPVEPPPKKVTLLQREKKEPKESKDRSRKDLSSHKPMNEAKMYSHKKKERFHEKQ
EDKDTNEPGSKSRDHESEGNCTKSKDVPRSDRRIRNKDRPSIEIYRPGMGKFSKQRLEKE
KALGSSTEVDSPSHSPSPTPKTKVVT
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagaaccatcttctgaattaatcaatagtacaaccatagtggaagtatcc
acaccaaaagatgtgggtgaagatgatcttgttagtttagacaaaactattcaaatagaa
aatagttcattgaagacaagtccacgagagcccgtggaagccaccaatcctccagaaaac
ttggataataaaaggaggaaagtaaaagaggagaaacctcactctaagattgttgttagg
agattacctccgacaatgactaaagaaatgttcctggatcaggtttctcctttgcctgaa
gtggactatatgtactatattcagggagataccaacaatggatttaatccattttcaagg
gcttacttgaatttcattaaccaagatgatctgttttccttttcaaggacttttgacaac
tacgtctttttggatgcaaagggccaagaatatccagcagttgttgaatttgccatgttc
caacgtgttcctaaacaacgaccaaagaagaaggatcctttgatgggaacaattgaatct
gatcctacatatataacatttaaagagaacttattagcagaagccttagaaaattcgaaa
actggaggaaaagcagttaagcaacattattttgaaactgaaatttccactgctgaggaa
gtgaacaccacaccattattagaatttctgaaggttcgtcgagcagaaaaggcacgaatt
cgtgaagaacgtagagaggagaagaaacgaaaggaactagaaagaaagctgaagcaaaag
acgaaagataagaagggagagggtgatgatgaagaaccctctaaagaagccaaaatccaa
cataaaccttcagaaaaagaccctgcgaaggaggtgaacatagaaagaaataagcaagta
ggtgacaatgaaaaattgggaaaagaatcatttgataaatcaaatgttaattttaaaaaa
gaaagcagtgagaaaccgactattttacaggatcaaaaatttttaattttcaataaatcc
gataaagttgaacaacaaaatgaaaatgaatctcagagtaaaggtaatagttcttcaaat
gatggtgctgttgagtcaaatgctgatatatcttctggagacaaaaattctgttccagat
gcagaagttcaaaaaataaaagaggcagagcaacagacgatgtatttgaggaagttgctt
ggcttgctaccgtcagacagtcagctatccgcttcaaaaaaagaggtcctttcaaaggat
aagagggataataaagaacgggatagtcgaaatgtgaaaaagaaggatgataaagagcgt
gtaaaagatacaaggattagagaatttaaaagtcggggtggaaaaagttaccaggaagaa
agactccgcttagcggaaagaagagaagaacaaaagaaaagagatctcttgaactccgga
gataaaaaaacagagtttgatttgggcgaagctgaccctggtgaaggtactggtgaacag
cctaaggcgcctgaagaaaaaacttccaggtttgagaagaaaaagtatgaatataggaaa
aaatatgataatgatgattggaaggatgaaaagaagaggagccgaaatgagcggagtaat
ttgaaaagagatggaagggaaaggaaagatgattatagaagaaatcaagataaaaagacc
agtgattctgatttaaggaggaaagttaagactttcaagaattcagaattttccaaagtt
atggatgataaaaagaagtcttcagctgttcatgaggaagttgatggaaaagtccaggaa
gggactgataaaaataaaattgagaaaaaagatagcgaattatcaaaagacaaatggaaa
agtgttgatgacttagtacttacatctacagtggaaaggaaaaattcagataagattgta
atagaaaataatgatgtaatagttggcagtaagaagcgtcattcttctttagaaaatttg
aggcatgaagaaaaatgtcctgtagaaccaccacccaaaaaggtaacattgcttcagaga
gaaaaaaaagaaccaaaagaaagcaaagaccgctctagaaaagatttgtccagccataaa
ccaatgaatgaagcaaaaatgtattcccataagaagaaagaaaggtttcatgaaaaacaa
gaagataaagatactaatgaaccaggttctaaaagtagagatcatgaatcagaaggaaac
tgtacaaagtcgaaggatgttccacggtctgataggcgcataaggaacaaagatcgtccc
tcaattgaaatatatcgtcctggtatggggaagttcagcaaacagcgcttggagaaagag
aaagctctcgggagtagtactgaagtggattctccctcacatagtccttcccctactcct
aagactaaggtcgttacttga
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