KEGG   Halyomorpha halys (brown marmorated stink bug): 106682647
Entry
106682647         CDS       T07536                                 
Symbol
Rrp42
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
hhal  Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106682647 (Rrp42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhal03019]
    106682647 (Rrp42)
Messenger RNA biogenesis [BR:hhal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106682647 (Rrp42)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     106682647 (Rrp42)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 106682647
NCBI-ProteinID: XP_014279108
LinkDB
Position
Unknown
AA seq 285 aa
MVRLSPEEKIYIIHGVEDNIREDGRTQMQYRSIEVETGIIPSAMGSARIKLGNTDVIACV
KADTFTPTWNKPDEGKLQLHVDLSATASPRFEGRRGEQTSEEITTILNKAYESIKLESFC
IVPQVKCWLVDVDISVLSCDGNMYDAIGFAVKAALATAMIPKIVASDEDEGEKELQITDD
PFDTWTPNVSNVPCLVTLSKVGDSVMIDATNKEEQCSSFTCILAVTETGKILSTFKVGPG
SVQPATFSKLILEASSIGKSLHSELLSALKKEQGIRKREIHGFLN
NT seq 858 nt   +upstreamnt  +downstreamnt
atggtgcggttaagtccagaagaaaaaatttatattattcatggcgttgaagataacatt
agagaagatggtagaacccaaatgcagtatcgatctatagaagtcgaaacaggtatcatt
cctagtgcaatgggatcagctcgaataaagttaggcaatactgatgttatagcctgtgta
aaagcggacacattcactccgacttggaataagcctgatgaagggaagttacaacttcat
gtcgatttatctgccactgcgtctccacggtttgaagggcgaagaggtgaacaaacttct
gaagagataactaccattctaaataaagcctatgaaagcatcaagctcgagtcgttttgt
attgttcctcaggttaaatgctggttggtagatgttgacatatcagtgctttcttgtgat
ggaaatatgtacgatgcgattggatttgctgttaaggctgctttggcaactgcaatgatt
ccgaaaatcgttgcatcagacgaagatgaaggcgaaaaggaattacaaatcacggatgat
ccttttgatacttggacaccgaatgtttcaaatgtaccttgtttagttactttatctaaa
gttggtgatagtgttatgatagatgcaacaaataaagaagagcaatgcagttcattcact
tgtattttagcggttacagaaactggtaagattctttccacgtttaaagttggacctgga
agcgttcaacctgccacattttctaaattgattttagaagctagtagcattggtaaatcc
ctccattcggaactgttatctgccctgaagaaagaacaaggcatacgtaaaagggagatt
catggttttttaaattaa

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